Gene info for HMPREF1078_RS06045 in Parabacteroides merdae CL09T00C40

Annotation: glycoside hydrolase family 2 TIM barrel-domain containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 550,108 to 553,107
See nucleotide sequence around HMPREF1078_RS06045 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS06015 and HMPREF1078_RS06020 are separated by 44 nucleotidesHMPREF1078_RS06020 and HMPREF1078_RS06030 are separated by 571 nucleotidesHMPREF1078_RS06030 and HMPREF1078_RS06035 are separated by 127 nucleotidesHMPREF1078_RS06035 and HMPREF1078_RS06040 are separated by 84 nucleotidesHMPREF1078_RS06040 and HMPREF1078_RS06045 are separated by 175 nucleotidesHMPREF1078_RS06045 and HMPREF1078_RS06050 are separated by 30 nucleotidesHMPREF1078_RS06050 and HMPREF1078_RS06055 are separated by 12 nucleotidesHMPREF1078_RS06055 and HMPREF1078_RS06060 are separated by 5 nucleotidesHMPREF1078_RS06060 and HMPREF1078_RS06065 are separated by 29 nucleotidesHMPREF1078_RS06065 and HMPREF1078_RS06070 are separated by 136 nucleotides HMPREF1078_RS06015: HMPREF1078_RS06015 - DEAD/DEAH box helicase, at 542,645 to 544,411 _RS06015 HMPREF1078_RS06020: HMPREF1078_RS06020 - hypothetical protein, at 544,456 to 544,794 _RS06020 HMPREF1078_RS06030: HMPREF1078_RS06030 - beta-N-acetylhexosaminidase, at 545,366 to 546,940 _RS06030 HMPREF1078_RS06035: HMPREF1078_RS06035 - C69 family dipeptidase, at 547,068 to 548,678 _RS06035 HMPREF1078_RS06040: HMPREF1078_RS06040 - C1 family peptidase, at 548,763 to 549,932 _RS06040 HMPREF1078_RS06045: HMPREF1078_RS06045 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 550,108 to 553,107 _RS06045 HMPREF1078_RS06050: HMPREF1078_RS06050 - sodium/sugar symporter, at 553,138 to 554,691 _RS06050 HMPREF1078_RS06055: HMPREF1078_RS06055 - SDR family oxidoreductase, at 554,704 to 555,495 _RS06055 HMPREF1078_RS06060: HMPREF1078_RS06060 - mandelate racemase/muconate lactonizing enzyme family protein, at 555,501 to 556,670 _RS06060 HMPREF1078_RS06065: HMPREF1078_RS06065 - RraA family protein, at 556,700 to 557,392 _RS06065 HMPREF1078_RS06070: HMPREF1078_RS06070 - helix-turn-helix domain-containing protein, at 557,529 to 558,404 _RS06070
Locus Name Description Strand Phenotype
HMPREF1078_RS06015 HMPREF1078_RS06015 DEAD/DEAH box helicase + insig.
HMPREF1078_RS06020 HMPREF1078_RS06020 hypothetical protein - no data
HMPREF1078_RS06030 HMPREF1078_RS06030 beta-N-acetylhexosaminidase - insig.
HMPREF1078_RS06035 HMPREF1078_RS06035 C69 family dipeptidase + insig.
HMPREF1078_RS06040 HMPREF1078_RS06040 C1 family peptidase + insig.
HMPREF1078_RS06045 HMPREF1078_RS06045 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS06050 HMPREF1078_RS06050 sodium/sugar symporter - insig.
HMPREF1078_RS06055 HMPREF1078_RS06055 SDR family oxidoreductase - insig.
HMPREF1078_RS06060 HMPREF1078_RS06060 mandelate racemase/muconate lactonizing enzyme family protein - insig.
HMPREF1078_RS06065 HMPREF1078_RS06065 RraA family protein - insig.
HMPREF1078_RS06070 HMPREF1078_RS06070 helix-turn-helix domain-containing protein - insig.

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