Gene info for HMPREF1078_RS05925 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 520,207 to 520,827
See nucleotide sequence around HMPREF1078_RS05925 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05900 and HMPREF1078_RS05905 are separated by 156 nucleotidesHMPREF1078_RS05905 and HMPREF1078_RS05910 are separated by 82 nucleotidesHMPREF1078_RS05910 and HMPREF1078_RS05915 are separated by 271 nucleotidesHMPREF1078_RS05915 and HMPREF1078_RS05920 are separated by 197 nucleotidesHMPREF1078_RS05920 and HMPREF1078_RS05925 are separated by 12 nucleotidesHMPREF1078_RS05925 and HMPREF1078_RS05930 are separated by 16 nucleotidesHMPREF1078_RS05930 and HMPREF1078_RS05935 overlap by 4 nucleotidesHMPREF1078_RS05935 and HMPREF1078_RS05940 are separated by 118 nucleotidesHMPREF1078_RS05940 and HMPREF1078_RS05945 are separated by 101 nucleotidesHMPREF1078_RS05945 and HMPREF1078_RS05950 are separated by 103 nucleotides HMPREF1078_RS05900: HMPREF1078_RS05900 - altronate dehydratase family protein, at 511,011 to 512,498 _RS05900 HMPREF1078_RS05905: HMPREF1078_RS05905 - Na/Pi cotransporter family protein, at 512,655 to 514,343 _RS05905 HMPREF1078_RS05910: HMPREF1078_RS05910 - nucleoside kinase, at 514,426 to 516,093 _RS05910 HMPREF1078_RS05915: HMPREF1078_RS05915 - ATP-binding protein, at 516,365 to 518,527 _RS05915 HMPREF1078_RS05920: HMPREF1078_RS05920 - RNA polymerase factor sigma-54, at 518,725 to 520,194 _RS05920 HMPREF1078_RS05925: HMPREF1078_RS05925 - hypothetical protein, at 520,207 to 520,827 _RS05925 HMPREF1078_RS05930: HMPREF1078_RS05930 - glycine cleavage system protein GcvH, at 520,844 to 521,224 _RS05930 HMPREF1078_RS05935: HMPREF1078_RS05935 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 521,221 to 521,727 _RS05935 HMPREF1078_RS05940: HMPREF1078_RS05940 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, at 521,846 to 523,687 _RS05940 HMPREF1078_RS05945: HMPREF1078_RS05945 - right-handed parallel beta-helix repeat-containing protein, at 523,789 to 525,597 _RS05945 HMPREF1078_RS05950: HMPREF1078_RS05950 - cysteine--tRNA ligase, at 525,701 to 527,179 _RS05950
Locus Name Description Strand Phenotype
HMPREF1078_RS05900 HMPREF1078_RS05900 altronate dehydratase family protein + insig.
HMPREF1078_RS05905 HMPREF1078_RS05905 Na/Pi cotransporter family protein - strong
HMPREF1078_RS05910 HMPREF1078_RS05910 nucleoside kinase + strong
HMPREF1078_RS05915 HMPREF1078_RS05915 ATP-binding protein - insig.
HMPREF1078_RS05920 HMPREF1078_RS05920 RNA polymerase factor sigma-54 + cofit
HMPREF1078_RS05925 HMPREF1078_RS05925 hypothetical protein + cofit
HMPREF1078_RS05930 HMPREF1078_RS05930 glycine cleavage system protein GcvH + insig.
HMPREF1078_RS05935 HMPREF1078_RS05935 5-(carboxyamino)imidazole ribonucleotide mutase + strong
HMPREF1078_RS05940 HMPREF1078_RS05940 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase + no data
HMPREF1078_RS05945 HMPREF1078_RS05945 right-handed parallel beta-helix repeat-containing protein - insig.
HMPREF1078_RS05950 HMPREF1078_RS05950 cysteine--tRNA ligase + no data

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