Gene info for HMPREF1078_RS05890 in Parabacteroides merdae CL09T00C40

Annotation: SMP-30/gluconolactonase/LRE family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 508,473 to 509,378
See nucleotide sequence around HMPREF1078_RS05890 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05865 and HMPREF1078_RS05870 are separated by 158 nucleotidesHMPREF1078_RS05870 and HMPREF1078_RS05875 are separated by 139 nucleotidesHMPREF1078_RS05875 and HMPREF1078_RS05880 are separated by 1 nucleotidesHMPREF1078_RS05880 and HMPREF1078_RS05885 are separated by 79 nucleotidesHMPREF1078_RS05885 and HMPREF1078_RS05890 are separated by 83 nucleotidesHMPREF1078_RS05890 and HMPREF1078_RS05895 are separated by 193 nucleotidesHMPREF1078_RS05895 and HMPREF1078_RS05900 overlap by 1 nucleotidesHMPREF1078_RS05900 and HMPREF1078_RS05905 are separated by 156 nucleotidesHMPREF1078_RS05905 and HMPREF1078_RS05910 are separated by 82 nucleotidesHMPREF1078_RS05910 and HMPREF1078_RS05915 are separated by 271 nucleotides HMPREF1078_RS05865: HMPREF1078_RS05865 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 501,143 to 503,644 _RS05865 HMPREF1078_RS05870: HMPREF1078_RS05870 - PglZ domain-containing protein, at 503,803 to 505,353 _RS05870 HMPREF1078_RS05875: HMPREF1078_RS05875 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 505,493 to 505,912 _RS05875 HMPREF1078_RS05880: HMPREF1078_RS05880 - immunity 17 family protein, at 505,914 to 506,129 _RS05880 HMPREF1078_RS05885: HMPREF1078_RS05885 - ribonuclease R, at 506,209 to 508,389 _RS05885 HMPREF1078_RS05890: HMPREF1078_RS05890 - SMP-30/gluconolactonase/LRE family protein, at 508,473 to 509,378 _RS05890 HMPREF1078_RS05895: HMPREF1078_RS05895 - tagaturonate reductase, at 509,572 to 511,011 _RS05895 HMPREF1078_RS05900: HMPREF1078_RS05900 - altronate dehydratase family protein, at 511,011 to 512,498 _RS05900 HMPREF1078_RS05905: HMPREF1078_RS05905 - Na/Pi cotransporter family protein, at 512,655 to 514,343 _RS05905 HMPREF1078_RS05910: HMPREF1078_RS05910 - nucleoside kinase, at 514,426 to 516,093 _RS05910 HMPREF1078_RS05915: HMPREF1078_RS05915 - ATP-binding protein, at 516,365 to 518,527 _RS05915
Locus Name Description Strand Phenotype
HMPREF1078_RS05865 HMPREF1078_RS05865 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS05870 HMPREF1078_RS05870 PglZ domain-containing protein + strong
HMPREF1078_RS05875 HMPREF1078_RS05875 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE + no data
HMPREF1078_RS05880 HMPREF1078_RS05880 immunity 17 family protein + insig.
HMPREF1078_RS05885 HMPREF1078_RS05885 ribonuclease R - strong
HMPREF1078_RS05890 HMPREF1078_RS05890 SMP-30/gluconolactonase/LRE family protein - insig.
HMPREF1078_RS05895 HMPREF1078_RS05895 tagaturonate reductase + insig.
HMPREF1078_RS05900 HMPREF1078_RS05900 altronate dehydratase family protein + insig.
HMPREF1078_RS05905 HMPREF1078_RS05905 Na/Pi cotransporter family protein - strong
HMPREF1078_RS05910 HMPREF1078_RS05910 nucleoside kinase + strong
HMPREF1078_RS05915 HMPREF1078_RS05915 ATP-binding protein - insig.

Or browse nearby genes

Or see the comparative fitness browser