Gene info for HMPREF1078_RS05810 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 483,752 to 487,231
See nucleotide sequence around HMPREF1078_RS05810 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05785 and HMPREF1078_RS05790 are separated by 21 nucleotidesHMPREF1078_RS05790 and HMPREF1078_RS05795 overlap by 4 nucleotidesHMPREF1078_RS05795 and HMPREF1078_RS05800 are separated by 1 nucleotidesHMPREF1078_RS05800 and HMPREF1078_RS05805 are separated by 85 nucleotidesHMPREF1078_RS05805 and HMPREF1078_RS05810 are separated by 32 nucleotidesHMPREF1078_RS05810 and HMPREF1078_RS05815 are separated by 158 nucleotidesHMPREF1078_RS05815 and HMPREF1078_RS05820 are separated by 648 nucleotidesHMPREF1078_RS05820 and HMPREF1078_RS05825 are separated by 27 nucleotidesHMPREF1078_RS05825 and HMPREF1078_RS05830 are separated by 127 nucleotidesHMPREF1078_RS05830 and HMPREF1078_RS05835 are separated by 9 nucleotides HMPREF1078_RS05785: HMPREF1078_RS05785 - glycoside hydrolase family 31 protein, at 475,631 to 477,226 _RS05785 HMPREF1078_RS05790: HMPREF1078_RS05790 - alpha-N-acetylglucosaminidase, at 477,248 to 479,404 _RS05790 HMPREF1078_RS05795: HMPREF1078_RS05795 - DUF4832 domain-containing protein, at 479,401 to 480,972 _RS05795 HMPREF1078_RS05800: HMPREF1078_RS05800 - family 16 glycosylhydrolase, at 480,974 to 482,161 _RS05800 HMPREF1078_RS05805: HMPREF1078_RS05805 - RagB/SusD family nutrient uptake outer membrane protein, at 482,247 to 483,719 _RS05805 HMPREF1078_RS05810: HMPREF1078_RS05810 - TonB-dependent receptor, at 483,752 to 487,231 _RS05810 HMPREF1078_RS05815: HMPREF1078_RS05815 - FecR domain-containing protein, at 487,390 to 488,370 _RS05815 HMPREF1078_RS05820: HMPREF1078_RS05820 - RNA polymerase sigma-70 factor, at 489,019 to 489,561 _RS05820 HMPREF1078_RS05825: HMPREF1078_RS05825 - hypothetical protein, at 489,589 to 492,738 _RS05825 HMPREF1078_RS05830: HMPREF1078_RS05830 - riboflavin biosynthesis protein RibF, at 492,866 to 493,792 _RS05830 HMPREF1078_RS05835: HMPREF1078_RS05835 - M20 family metallo-hydrolase, at 493,802 to 494,857 _RS05835
Locus Name Description Strand Phenotype
HMPREF1078_RS05785 HMPREF1078_RS05785 glycoside hydrolase family 31 protein - insig.
HMPREF1078_RS05790 HMPREF1078_RS05790 alpha-N-acetylglucosaminidase - insig.
HMPREF1078_RS05795 HMPREF1078_RS05795 DUF4832 domain-containing protein - insig.
HMPREF1078_RS05800 HMPREF1078_RS05800 family 16 glycosylhydrolase - insig.
HMPREF1078_RS05805 HMPREF1078_RS05805 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS05810 HMPREF1078_RS05810 TonB-dependent receptor - insig.
HMPREF1078_RS05815 HMPREF1078_RS05815 FecR domain-containing protein - insig.
HMPREF1078_RS05820 HMPREF1078_RS05820 RNA polymerase sigma-70 factor - insig.
HMPREF1078_RS05825 HMPREF1078_RS05825 hypothetical protein - insig.
HMPREF1078_RS05830 HMPREF1078_RS05830 riboflavin biosynthesis protein RibF + no data
HMPREF1078_RS05835 HMPREF1078_RS05835 M20 family metallo-hydrolase + cofit

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