Gene info for HMPREF1078_RS05665 in Parabacteroides merdae CL09T00C40

Annotation: RNA polymerase sigma-70 factor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 438,809 to 439,342
See nucleotide sequence around HMPREF1078_RS05665 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05640 and HMPREF1078_RS05645 are separated by 9 nucleotidesHMPREF1078_RS05645 and HMPREF1078_RS05650 are separated by 8 nucleotidesHMPREF1078_RS05650 and HMPREF1078_RS05655 are separated by 19 nucleotidesHMPREF1078_RS05655 and HMPREF1078_RS05660 are separated by 194 nucleotidesHMPREF1078_RS05660 and HMPREF1078_RS05665 are separated by 63 nucleotidesHMPREF1078_RS05665 and HMPREF1078_RS05670 are separated by 1073 nucleotidesHMPREF1078_RS05670 and HMPREF1078_RS05675 are separated by 11 nucleotidesHMPREF1078_RS05675 and HMPREF1078_RS05680 are separated by 13 nucleotidesHMPREF1078_RS05680 and HMPREF1078_RS05685 are separated by 156 nucleotidesHMPREF1078_RS05685 and HMPREF1078_RS05690 are separated by 153 nucleotides HMPREF1078_RS05640: HMPREF1078_RS05640 - glycoside hydrolase family 88 protein, at 429,822 to 430,940 _RS05640 HMPREF1078_RS05645: HMPREF1078_RS05645 - hypothetical protein, at 430,950 to 432,692 _RS05645 HMPREF1078_RS05650: HMPREF1078_RS05650 - RagB/SusD family nutrient uptake outer membrane protein, at 432,701 to 434,308 _RS05650 HMPREF1078_RS05655: HMPREF1078_RS05655 - TonB-dependent receptor, at 434,328 to 437,567 _RS05655 HMPREF1078_RS05660: HMPREF1078_RS05660 - DUF4974 domain-containing protein, at 437,762 to 438,745 _RS05660 HMPREF1078_RS05665: HMPREF1078_RS05665 - RNA polymerase sigma-70 factor, at 438,809 to 439,342 _RS05665 HMPREF1078_RS05670: HMPREF1078_RS05670 - Gfo/Idh/MocA family oxidoreductase, at 440,416 to 441,801 _RS05670 HMPREF1078_RS05675: HMPREF1078_RS05675 - RagB/SusD family nutrient uptake outer membrane protein, at 441,813 to 443,528 _RS05675 HMPREF1078_RS05680: HMPREF1078_RS05680 - TonB-dependent receptor, at 443,542 to 446,778 _RS05680 HMPREF1078_RS05685: HMPREF1078_RS05685 - FecR family protein, at 446,935 to 447,930 _RS05685 HMPREF1078_RS05690: HMPREF1078_RS05690 - RNA polymerase sigma-70 factor, at 448,084 to 448,638 _RS05690
Locus Name Description Strand Phenotype
HMPREF1078_RS05640 HMPREF1078_RS05640 glycoside hydrolase family 88 protein - insig.
HMPREF1078_RS05645 HMPREF1078_RS05645 hypothetical protein - insig.
HMPREF1078_RS05650 HMPREF1078_RS05650 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS05655 HMPREF1078_RS05655 TonB-dependent receptor - insig.
HMPREF1078_RS05660 HMPREF1078_RS05660 DUF4974 domain-containing protein - cofit
HMPREF1078_RS05665 HMPREF1078_RS05665 RNA polymerase sigma-70 factor - insig.
HMPREF1078_RS05670 HMPREF1078_RS05670 Gfo/Idh/MocA family oxidoreductase - insig.
HMPREF1078_RS05675 HMPREF1078_RS05675 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS05680 HMPREF1078_RS05680 TonB-dependent receptor - insig.
HMPREF1078_RS05685 HMPREF1078_RS05685 FecR family protein - insig.
HMPREF1078_RS05690 HMPREF1078_RS05690 RNA polymerase sigma-70 factor - insig.

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