Gene info for HMPREF1078_RS05500 in Parabacteroides merdae CL09T00C40

Annotation: SUMF1/EgtB/PvdO family nonheme iron enzyme
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 388,890 to 390,317
See nucleotide sequence around HMPREF1078_RS05500 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05475 and HMPREF1078_RS05480 are separated by 89 nucleotidesHMPREF1078_RS05480 and HMPREF1078_RS05485 are separated by 599 nucleotidesHMPREF1078_RS05485 and HMPREF1078_RS05490 are separated by 73 nucleotidesHMPREF1078_RS05490 and HMPREF1078_RS05495 are separated by 111 nucleotidesHMPREF1078_RS05495 and HMPREF1078_RS05500 are separated by 3 nucleotidesHMPREF1078_RS05500 and HMPREF1078_RS05505 are separated by 88 nucleotidesHMPREF1078_RS05505 and HMPREF1078_RS05510 are separated by 6 nucleotidesHMPREF1078_RS05510 and HMPREF1078_RS05515 are separated by 47 nucleotidesHMPREF1078_RS05515 and HMPREF1078_RS05520 are separated by 100 nucleotidesHMPREF1078_RS05520 and HMPREF1078_RS05525 are separated by 148 nucleotides HMPREF1078_RS05475: HMPREF1078_RS05475 - TolC family protein, at 384,160 to 385,485 _RS05475 HMPREF1078_RS05480: HMPREF1078_RS05480 - hypothetical protein, at 385,575 to 386,366 _RS05480 HMPREF1078_RS05485: HMPREF1078_RS05485 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 386,966 to 387,529 _RS05485 HMPREF1078_RS05490: HMPREF1078_RS05490 - DUF2795 domain-containing protein, at 387,603 to 387,824 _RS05490 HMPREF1078_RS05495: HMPREF1078_RS05495 - type IX secretion system membrane protein PorP/SprF, at 387,936 to 388,886 _RS05495 HMPREF1078_RS05500: HMPREF1078_RS05500 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 388,890 to 390,317 _RS05500 HMPREF1078_RS05505: HMPREF1078_RS05505 - gliding motility protein GldL, at 390,406 to 391,437 _RS05505 HMPREF1078_RS05510: HMPREF1078_RS05510 - gliding motility protein GldM, at 391,444 to 393,012 _RS05510 HMPREF1078_RS05515: HMPREF1078_RS05515 - gliding motility protein GldN, at 393,060 to 394,151 _RS05515 HMPREF1078_RS05520: HMPREF1078_RS05520 - transglutaminase-like domain-containing protein, at 394,252 to 396,909 _RS05520 HMPREF1078_RS05525: HMPREF1078_RS05525 - potassium/proton antiporter, at 397,058 to 398,575 _RS05525
Locus Name Description Strand Phenotype
HMPREF1078_RS05475 HMPREF1078_RS05475 TolC family protein + insig.
HMPREF1078_RS05480 HMPREF1078_RS05480 hypothetical protein + no data
HMPREF1078_RS05485 HMPREF1078_RS05485 cob(I)yrinic acid a,c-diamide adenosyltransferase + insig.
HMPREF1078_RS05490 HMPREF1078_RS05490 DUF2795 domain-containing protein + no data
HMPREF1078_RS05495 HMPREF1078_RS05495 type IX secretion system membrane protein PorP/SprF + strong
HMPREF1078_RS05500 HMPREF1078_RS05500 SUMF1/EgtB/PvdO family nonheme iron enzyme + strong
HMPREF1078_RS05505 HMPREF1078_RS05505 gliding motility protein GldL + strong
HMPREF1078_RS05510 HMPREF1078_RS05510 gliding motility protein GldM + strong
HMPREF1078_RS05515 HMPREF1078_RS05515 gliding motility protein GldN + strong
HMPREF1078_RS05520 HMPREF1078_RS05520 transglutaminase-like domain-containing protein - cofit
HMPREF1078_RS05525 HMPREF1078_RS05525 potassium/proton antiporter + insig.

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