Gene info for HMPREF1078_RS05475 in Parabacteroides merdae CL09T00C40

Annotation: TolC family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 384,160 to 385,485
See nucleotide sequence around HMPREF1078_RS05475 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05450 and HMPREF1078_RS05455 are separated by 2 nucleotidesHMPREF1078_RS05455 and HMPREF1078_RS05460 overlap by 4 nucleotidesHMPREF1078_RS05460 and HMPREF1078_RS05465 are separated by 209 nucleotidesHMPREF1078_RS05465 and HMPREF1078_RS05470 are separated by 9 nucleotidesHMPREF1078_RS05470 and HMPREF1078_RS05475 are separated by 11 nucleotidesHMPREF1078_RS05475 and HMPREF1078_RS05480 are separated by 89 nucleotidesHMPREF1078_RS05480 and HMPREF1078_RS05485 are separated by 599 nucleotidesHMPREF1078_RS05485 and HMPREF1078_RS05490 are separated by 73 nucleotidesHMPREF1078_RS05490 and HMPREF1078_RS05495 are separated by 111 nucleotidesHMPREF1078_RS05495 and HMPREF1078_RS05500 are separated by 3 nucleotides HMPREF1078_RS05450: HMPREF1078_RS05450 - hypothetical protein, at 376,301 to 376,528 _RS05450 HMPREF1078_RS05455: HMPREF1078_RS05455 - DUF6057 family protein, at 376,531 to 378,252 _RS05455 HMPREF1078_RS05460: HMPREF1078_RS05460 - PD40 domain-containing protein, at 378,249 to 379,775 _RS05460 HMPREF1078_RS05465: HMPREF1078_RS05465 - efflux RND transporter periplasmic adaptor subunit, at 379,985 to 381,082 _RS05465 HMPREF1078_RS05470: HMPREF1078_RS05470 - efflux RND transporter permease subunit, at 381,092 to 384,148 _RS05470 HMPREF1078_RS05475: HMPREF1078_RS05475 - TolC family protein, at 384,160 to 385,485 _RS05475 HMPREF1078_RS05480: HMPREF1078_RS05480 - hypothetical protein, at 385,575 to 386,366 _RS05480 HMPREF1078_RS05485: HMPREF1078_RS05485 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 386,966 to 387,529 _RS05485 HMPREF1078_RS05490: HMPREF1078_RS05490 - DUF2795 domain-containing protein, at 387,603 to 387,824 _RS05490 HMPREF1078_RS05495: HMPREF1078_RS05495 - type IX secretion system membrane protein PorP/SprF, at 387,936 to 388,886 _RS05495 HMPREF1078_RS05500: HMPREF1078_RS05500 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 388,890 to 390,317 _RS05500
Locus Name Description Strand Phenotype
HMPREF1078_RS05450 HMPREF1078_RS05450 hypothetical protein + sig.
HMPREF1078_RS05455 HMPREF1078_RS05455 DUF6057 family protein + insig.
HMPREF1078_RS05460 HMPREF1078_RS05460 PD40 domain-containing protein + insig.
HMPREF1078_RS05465 HMPREF1078_RS05465 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS05470 HMPREF1078_RS05470 efflux RND transporter permease subunit + insig.
HMPREF1078_RS05475 HMPREF1078_RS05475 TolC family protein + insig.
HMPREF1078_RS05480 HMPREF1078_RS05480 hypothetical protein + no data
HMPREF1078_RS05485 HMPREF1078_RS05485 cob(I)yrinic acid a,c-diamide adenosyltransferase + cofit
HMPREF1078_RS05490 HMPREF1078_RS05490 DUF2795 domain-containing protein + no data
HMPREF1078_RS05495 HMPREF1078_RS05495 type IX secretion system membrane protein PorP/SprF + strong
HMPREF1078_RS05500 HMPREF1078_RS05500 SUMF1/EgtB/PvdO family nonheme iron enzyme + strong

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