Gene info for HMPREF1078_RS05355 in Parabacteroides merdae CL09T00C40

Annotation: tetratricopeptide repeat protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 344,677 to 345,912
See nucleotide sequence around HMPREF1078_RS05355 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05330 and HMPREF1078_RS05335 are separated by 250 nucleotidesHMPREF1078_RS05335 and HMPREF1078_RS05340 overlap by 4 nucleotidesHMPREF1078_RS05340 and HMPREF1078_RS05345 overlap by 1 nucleotidesHMPREF1078_RS05345 and HMPREF1078_RS05350 are separated by 42 nucleotidesHMPREF1078_RS05350 and HMPREF1078_RS05355 are separated by 66 nucleotidesHMPREF1078_RS05355 and HMPREF1078_RS19775 are separated by 111 nucleotidesHMPREF1078_RS19775 and HMPREF1078_RS19780 are separated by 167 nucleotidesHMPREF1078_RS19780 and HMPREF1078_RS05370 are separated by 13 nucleotidesHMPREF1078_RS05370 and HMPREF1078_RS05375 are separated by 159 nucleotidesHMPREF1078_RS05375 and HMPREF1078_RS05380 are separated by 273 nucleotides HMPREF1078_RS05330: HMPREF1078_RS05330 - glycerophosphodiester phosphodiesterase family protein, at 339,434 to 340,330 _RS05330 HMPREF1078_RS05335: HMPREF1078_RS05335 - DNA-processing protein DprA, at 340,581 to 341,696 _RS05335 HMPREF1078_RS05340: HMPREF1078_RS05340 - acyl-CoA thioesterase, at 341,693 to 342,100 _RS05340 HMPREF1078_RS05345: HMPREF1078_RS05345 - peptidase U32 family protein, at 342,100 to 343,371 _RS05345 HMPREF1078_RS05350: HMPREF1078_RS05350 - 6-bladed beta-propeller, at 343,414 to 344,610 _RS05350 HMPREF1078_RS05355: HMPREF1078_RS05355 - tetratricopeptide repeat protein, at 344,677 to 345,912 _RS05355 HMPREF1078_RS19775: HMPREF1078_RS19775 - hypothetical protein, at 346,024 to 346,992 _RS19775 HMPREF1078_RS19780: HMPREF1078_RS19780 - hypothetical protein, at 347,160 to 347,792 _RS19780 HMPREF1078_RS05370: HMPREF1078_RS05370 - BlaI/MecI/CopY family transcriptional regulator, at 347,806 to 348,162 _RS05370 HMPREF1078_RS05375: HMPREF1078_RS05375 - tRNA dihydrouridine synthase DusB, at 348,322 to 349,353 _RS05375 HMPREF1078_RS05380: HMPREF1078_RS05380 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit, at 349,627 to 350,382 _RS05380
Locus Name Description Strand Phenotype
HMPREF1078_RS05330 HMPREF1078_RS05330 glycerophosphodiester phosphodiesterase family protein + insig.
HMPREF1078_RS05335 HMPREF1078_RS05335 DNA-processing protein DprA - insig.
HMPREF1078_RS05340 HMPREF1078_RS05340 acyl-CoA thioesterase - cofit
HMPREF1078_RS05345 HMPREF1078_RS05345 peptidase U32 family protein - insig.
HMPREF1078_RS05350 HMPREF1078_RS05350 6-bladed beta-propeller - sig.
HMPREF1078_RS05355 HMPREF1078_RS05355 tetratricopeptide repeat protein - insig.
HMPREF1078_RS19775 HMPREF1078_RS19775 hypothetical protein - insig.
HMPREF1078_RS19780 HMPREF1078_RS19780 hypothetical protein - insig.
HMPREF1078_RS05370 HMPREF1078_RS05370 BlaI/MecI/CopY family transcriptional regulator - insig.
HMPREF1078_RS05375 HMPREF1078_RS05375 tRNA dihydrouridine synthase DusB + cofit
HMPREF1078_RS05380 HMPREF1078_RS05380 succinate dehydrogenase/fumarate reductase iron-sulfur subunit - no data

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