Gene info for HMPREF1078_RS05265 in Parabacteroides merdae CL09T00C40

Annotation: DcaP family trimeric outer membrane transporter
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 322,624 to 323,844
See nucleotide sequence around HMPREF1078_RS05265 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05240 and HMPREF1078_RS05245 are separated by 476 nucleotidesHMPREF1078_RS05245 and HMPREF1078_RS05250 are separated by 8 nucleotidesHMPREF1078_RS05250 and HMPREF1078_RS05255 are separated by 132 nucleotidesHMPREF1078_RS05255 and HMPREF1078_RS05260 are separated by 118 nucleotidesHMPREF1078_RS05260 and HMPREF1078_RS05265 overlap by 1 nucleotidesHMPREF1078_RS05265 and HMPREF1078_RS18495 are separated by 276 nucleotidesHMPREF1078_RS18495 and HMPREF1078_RS05270 are separated by 243 nucleotidesHMPREF1078_RS05270 and HMPREF1078_RS05275 are separated by 140 nucleotidesHMPREF1078_RS05275 and HMPREF1078_RS05280 are separated by 189 nucleotidesHMPREF1078_RS05280 and HMPREF1078_RS05285 are separated by 316 nucleotides HMPREF1078_RS05240: HMPREF1078_RS05240 - AraC family transcriptional regulator, at 315,639 to 316,490 _RS05240 HMPREF1078_RS05245: HMPREF1078_RS05245 - clostripain-related cysteine peptidase, at 316,967 to 318,094 _RS05245 HMPREF1078_RS05250: HMPREF1078_RS05250 - lamin tail domain-containing protein, at 318,103 to 320,472 _RS05250 HMPREF1078_RS05255: HMPREF1078_RS05255 - aspartate-semialdehyde dehydrogenase, at 320,605 to 321,615 _RS05255 HMPREF1078_RS05260: HMPREF1078_RS05260 - dTDP-4-dehydrorhamnose reductase, at 321,734 to 322,624 _RS05260 HMPREF1078_RS05265: HMPREF1078_RS05265 - DcaP family trimeric outer membrane transporter, at 322,624 to 323,844 _RS05265 HMPREF1078_RS18495: HMPREF1078_RS18495 - hypothetical protein, at 324,121 to 324,393 _RS18495 HMPREF1078_RS05270: HMPREF1078_RS05270 - TrpB-like pyridoxal phosphate-dependent enzyme, at 324,637 to 326,001 _RS05270 HMPREF1078_RS05275: HMPREF1078_RS05275 - DUF3836 domain-containing protein, at 326,142 to 326,552 _RS05275 HMPREF1078_RS05280: HMPREF1078_RS05280 - helix-turn-helix transcriptional regulator, at 326,742 to 326,954 _RS05280 HMPREF1078_RS05285: HMPREF1078_RS05285 - DUF2975 domain-containing protein, at 327,271 to 327,936 _RS05285
Locus Name Description Strand Phenotype
HMPREF1078_RS05240 HMPREF1078_RS05240 AraC family transcriptional regulator + sig.
HMPREF1078_RS05245 HMPREF1078_RS05245 clostripain-related cysteine peptidase + insig.
HMPREF1078_RS05250 HMPREF1078_RS05250 lamin tail domain-containing protein - insig.
HMPREF1078_RS05255 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase + no data
HMPREF1078_RS05260 HMPREF1078_RS05260 dTDP-4-dehydrorhamnose reductase - insig.
HMPREF1078_RS05265 HMPREF1078_RS05265 DcaP family trimeric outer membrane transporter - cofit
HMPREF1078_RS18495 HMPREF1078_RS18495 hypothetical protein - insig.
HMPREF1078_RS05270 HMPREF1078_RS05270 TrpB-like pyridoxal phosphate-dependent enzyme + insig.
HMPREF1078_RS05275 HMPREF1078_RS05275 DUF3836 domain-containing protein - insig.
HMPREF1078_RS05280 HMPREF1078_RS05280 helix-turn-helix transcriptional regulator - strong
HMPREF1078_RS05285 HMPREF1078_RS05285 DUF2975 domain-containing protein - strong

Or browse nearby genes

Or see the comparative fitness browser