Gene info for HMPREF1078_RS05245 in Parabacteroides merdae CL09T00C40

Annotation: clostripain-related cysteine peptidase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 316,967 to 318,094
See nucleotide sequence around HMPREF1078_RS05245 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05220 and HMPREF1078_RS05225 are separated by 249 nucleotidesHMPREF1078_RS05225 and HMPREF1078_RS05230 are separated by 135 nucleotidesHMPREF1078_RS05230 and HMPREF1078_RS05235 are separated by 242 nucleotidesHMPREF1078_RS05235 and HMPREF1078_RS05240 are separated by 12 nucleotidesHMPREF1078_RS05240 and HMPREF1078_RS05245 are separated by 476 nucleotidesHMPREF1078_RS05245 and HMPREF1078_RS05250 are separated by 8 nucleotidesHMPREF1078_RS05250 and HMPREF1078_RS05255 are separated by 132 nucleotidesHMPREF1078_RS05255 and HMPREF1078_RS05260 are separated by 118 nucleotidesHMPREF1078_RS05260 and HMPREF1078_RS05265 overlap by 1 nucleotidesHMPREF1078_RS05265 and HMPREF1078_RS18495 are separated by 276 nucleotides HMPREF1078_RS05220: HMPREF1078_RS05220 - hypothetical protein, at 307,231 to 307,455 _RS05220 HMPREF1078_RS05225: HMPREF1078_RS05225 - excinuclease ABC subunit UvrA, at 307,705 to 310,491 _RS05225 HMPREF1078_RS05230: HMPREF1078_RS05230 - glycosyl hydrolase, at 310,627 to 313,854 _RS05230 HMPREF1078_RS05235: HMPREF1078_RS05235 - family 10 glycosylhydrolase, at 314,097 to 315,626 _RS05235 HMPREF1078_RS05240: HMPREF1078_RS05240 - AraC family transcriptional regulator, at 315,639 to 316,490 _RS05240 HMPREF1078_RS05245: HMPREF1078_RS05245 - clostripain-related cysteine peptidase, at 316,967 to 318,094 _RS05245 HMPREF1078_RS05250: HMPREF1078_RS05250 - lamin tail domain-containing protein, at 318,103 to 320,472 _RS05250 HMPREF1078_RS05255: HMPREF1078_RS05255 - aspartate-semialdehyde dehydrogenase, at 320,605 to 321,615 _RS05255 HMPREF1078_RS05260: HMPREF1078_RS05260 - dTDP-4-dehydrorhamnose reductase, at 321,734 to 322,624 _RS05260 HMPREF1078_RS05265: HMPREF1078_RS05265 - DcaP family trimeric outer membrane transporter, at 322,624 to 323,844 _RS05265 HMPREF1078_RS18495: HMPREF1078_RS18495 - hypothetical protein, at 324,121 to 324,393 _RS18495
Locus Name Description Strand Phenotype
HMPREF1078_RS05220 HMPREF1078_RS05220 hypothetical protein + insig.
HMPREF1078_RS05225 HMPREF1078_RS05225 excinuclease ABC subunit UvrA - strong
HMPREF1078_RS05230 HMPREF1078_RS05230 glycosyl hydrolase - insig.
HMPREF1078_RS05235 HMPREF1078_RS05235 family 10 glycosylhydrolase + strong
HMPREF1078_RS05240 HMPREF1078_RS05240 AraC family transcriptional regulator + sig.
HMPREF1078_RS05245 HMPREF1078_RS05245 clostripain-related cysteine peptidase + insig.
HMPREF1078_RS05250 HMPREF1078_RS05250 lamin tail domain-containing protein - insig.
HMPREF1078_RS05255 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase + no data
HMPREF1078_RS05260 HMPREF1078_RS05260 dTDP-4-dehydrorhamnose reductase - insig.
HMPREF1078_RS05265 HMPREF1078_RS05265 DcaP family trimeric outer membrane transporter - cofit
HMPREF1078_RS18495 HMPREF1078_RS18495 hypothetical protein - insig.

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