Gene info for HMPREF1078_RS05230 in Parabacteroides merdae CL09T00C40

Annotation: glycosyl hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 310,627 to 313,854
See nucleotide sequence around HMPREF1078_RS05230 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05205 and HMPREF1078_RS05210 are separated by 27 nucleotidesHMPREF1078_RS05210 and HMPREF1078_RS05215 are separated by 7 nucleotidesHMPREF1078_RS05215 and HMPREF1078_RS05220 are separated by 376 nucleotidesHMPREF1078_RS05220 and HMPREF1078_RS05225 are separated by 249 nucleotidesHMPREF1078_RS05225 and HMPREF1078_RS05230 are separated by 135 nucleotidesHMPREF1078_RS05230 and HMPREF1078_RS05235 are separated by 242 nucleotidesHMPREF1078_RS05235 and HMPREF1078_RS05240 are separated by 12 nucleotidesHMPREF1078_RS05240 and HMPREF1078_RS05245 are separated by 476 nucleotidesHMPREF1078_RS05245 and HMPREF1078_RS05250 are separated by 8 nucleotidesHMPREF1078_RS05250 and HMPREF1078_RS05255 are separated by 132 nucleotides HMPREF1078_RS05205: HMPREF1078_RS05205 - carbohydrate kinase, at 303,599 to 304,462 _RS05205 HMPREF1078_RS05210: HMPREF1078_RS05210 - DUF4980 domain-containing protein, at 304,490 to 306,136 _RS05210 HMPREF1078_RS05215: HMPREF1078_RS05215 - UMP kinase, at 306,144 to 306,854 _RS05215 HMPREF1078_RS05220: HMPREF1078_RS05220 - hypothetical protein, at 307,231 to 307,455 _RS05220 HMPREF1078_RS05225: HMPREF1078_RS05225 - excinuclease ABC subunit UvrA, at 307,705 to 310,491 _RS05225 HMPREF1078_RS05230: HMPREF1078_RS05230 - glycosyl hydrolase, at 310,627 to 313,854 _RS05230 HMPREF1078_RS05235: HMPREF1078_RS05235 - family 10 glycosylhydrolase, at 314,097 to 315,626 _RS05235 HMPREF1078_RS05240: HMPREF1078_RS05240 - AraC family transcriptional regulator, at 315,639 to 316,490 _RS05240 HMPREF1078_RS05245: HMPREF1078_RS05245 - clostripain-related cysteine peptidase, at 316,967 to 318,094 _RS05245 HMPREF1078_RS05250: HMPREF1078_RS05250 - lamin tail domain-containing protein, at 318,103 to 320,472 _RS05250 HMPREF1078_RS05255: HMPREF1078_RS05255 - aspartate-semialdehyde dehydrogenase, at 320,605 to 321,615 _RS05255
Locus Name Description Strand Phenotype
HMPREF1078_RS05205 HMPREF1078_RS05205 carbohydrate kinase - cofit
HMPREF1078_RS05210 HMPREF1078_RS05210 DUF4980 domain-containing protein - cofit
HMPREF1078_RS05215 HMPREF1078_RS05215 UMP kinase - no data
HMPREF1078_RS05220 HMPREF1078_RS05220 hypothetical protein + insig.
HMPREF1078_RS05225 HMPREF1078_RS05225 excinuclease ABC subunit UvrA - strong
HMPREF1078_RS05230 HMPREF1078_RS05230 glycosyl hydrolase - insig.
HMPREF1078_RS05235 HMPREF1078_RS05235 family 10 glycosylhydrolase + strong
HMPREF1078_RS05240 HMPREF1078_RS05240 AraC family transcriptional regulator + sig.
HMPREF1078_RS05245 HMPREF1078_RS05245 clostripain-related cysteine peptidase + insig.
HMPREF1078_RS05250 HMPREF1078_RS05250 lamin tail domain-containing protein - insig.
HMPREF1078_RS05255 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase + no data

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