Gene info for HMPREF1078_RS05085 in Parabacteroides merdae CL09T00C40

Annotation: toprim domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 278,573 to 279,538
See nucleotide sequence around HMPREF1078_RS05085 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05060 and HMPREF1078_RS05065 overlap by 11 nucleotidesHMPREF1078_RS05065 and HMPREF1078_RS05070 are separated by 88 nucleotidesHMPREF1078_RS05070 and HMPREF1078_RS05075 are separated by 4 nucleotidesHMPREF1078_RS05075 and HMPREF1078_RS05080 overlap by 35 nucleotidesHMPREF1078_RS05080 and HMPREF1078_RS05085 are separated by 146 nucleotidesHMPREF1078_RS05085 and HMPREF1078_RS05090 are separated by 163 nucleotidesHMPREF1078_RS05090 and HMPREF1078_RS05095 are separated by 5 nucleotidesHMPREF1078_RS05095 and HMPREF1078_RS05100 are separated by 125 nucleotidesHMPREF1078_RS05100 and HMPREF1078_RS05105 are separated by 453 nucleotidesHMPREF1078_RS05105 and HMPREF1078_RS19525 are separated by 7 nucleotides HMPREF1078_RS05060: HMPREF1078_RS05060 - DoxX family protein, at 274,799 to 275,401 _RS05060 HMPREF1078_RS05065: HMPREF1078_RS05065 - DMT family transporter, at 275,391 to 276,344 _RS05065 HMPREF1078_RS05070: HMPREF1078_RS05070 - hypothetical protein, at 276,433 to 277,152 _RS05070 HMPREF1078_RS05075: HMPREF1078_RS05075 - relaxase/mobilization nuclease domain-containing protein, at 277,157 to 278,077 _RS05075 HMPREF1078_RS05080: HMPREF1078_RS05080 - MobC family plasmid mobilization relaxosome protein, at 278,043 to 278,426 _RS05080 HMPREF1078_RS05085: HMPREF1078_RS05085 - toprim domain-containing protein, at 278,573 to 279,538 _RS05085 HMPREF1078_RS05090: HMPREF1078_RS05090 - AAA family ATPase, at 279,702 to 280,775 _RS05090 HMPREF1078_RS05095: HMPREF1078_RS05095 - helix-turn-helix domain-containing protein, at 280,781 to 281,068 _RS05095 HMPREF1078_RS05100: HMPREF1078_RS05100 - hypothetical protein, at 281,194 to 282,102 _RS05100 HMPREF1078_RS05105: HMPREF1078_RS05105 - site-specific integrase, at 282,556 to 283,893 _RS05105 HMPREF1078_RS19525: HMPREF1078_RS19525 - DUF6043 family protein, at 283,901 to 284,842 _RS19525
Locus Name Description Strand Phenotype
HMPREF1078_RS05060 HMPREF1078_RS05060 DoxX family protein + insig.
HMPREF1078_RS05065 HMPREF1078_RS05065 DMT family transporter + insig.
HMPREF1078_RS05070 HMPREF1078_RS05070 hypothetical protein - insig.
HMPREF1078_RS05075 HMPREF1078_RS05075 relaxase/mobilization nuclease domain-containing protein - insig.
HMPREF1078_RS05080 HMPREF1078_RS05080 MobC family plasmid mobilization relaxosome protein - insig.
HMPREF1078_RS05085 HMPREF1078_RS05085 toprim domain-containing protein - insig.
HMPREF1078_RS05090 HMPREF1078_RS05090 AAA family ATPase - insig.
HMPREF1078_RS05095 HMPREF1078_RS05095 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS05100 HMPREF1078_RS05100 hypothetical protein - insig.
HMPREF1078_RS05105 HMPREF1078_RS05105 site-specific integrase + insig.
HMPREF1078_RS19525 HMPREF1078_RS19525 DUF6043 family protein + insig.

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