Gene info for HMPREF1078_RS05035 in Parabacteroides merdae CL09T00C40

Annotation: site-specific integrase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 269,556 to 270,779
See nucleotide sequence around HMPREF1078_RS05035 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05010 and HMPREF1078_RS05015 are separated by 592 nucleotidesHMPREF1078_RS05015 and HMPREF1078_RS05020 are separated by 73 nucleotidesHMPREF1078_RS05020 and HMPREF1078_RS05025 are separated by 27 nucleotidesHMPREF1078_RS05025 and HMPREF1078_RS05030 are separated by 320 nucleotidesHMPREF1078_RS05030 and HMPREF1078_RS05035 are separated by 415 nucleotidesHMPREF1078_RS05035 and HMPREF1078_RS05040 are separated by 25 nucleotidesHMPREF1078_RS05040 and HMPREF1078_RS05045 are separated by 150 nucleotidesHMPREF1078_RS05045 and HMPREF1078_RS05050 are separated by 115 nucleotidesHMPREF1078_RS05050 and HMPREF1078_RS05055 are separated by 55 nucleotidesHMPREF1078_RS05055 and HMPREF1078_RS05060 are separated by 14 nucleotides HMPREF1078_RS05010: HMPREF1078_RS05010 - RNA polymerase sigma-70 factor, at 260,908 to 261,477 _RS05010 HMPREF1078_RS05015: HMPREF1078_RS05015 - PfkB family carbohydrate kinase, at 262,070 to 262,951 _RS05015 HMPREF1078_RS05020: HMPREF1078_RS05020 - sugar MFS transporter, at 263,025 to 264,236 _RS05020 HMPREF1078_RS05025: HMPREF1078_RS05025 - PAS domain-containing sensor histidine kinase, at 264,264 to 267,659 _RS05025 HMPREF1078_RS05030: HMPREF1078_RS05030 - acyltransferase, at 267,980 to 269,140 _RS05030 HMPREF1078_RS05035: HMPREF1078_RS05035 - site-specific integrase, at 269,556 to 270,779 _RS05035 HMPREF1078_RS05040: HMPREF1078_RS05040 - PDDEXK nuclease domain-containing protein, at 270,805 to 271,944 _RS05040 HMPREF1078_RS05045: HMPREF1078_RS05045 - helix-turn-helix domain-containing protein, at 272,095 to 272,964 _RS05045 HMPREF1078_RS05050: HMPREF1078_RS05050 - glucose 1-dehydrogenase, at 273,080 to 273,880 _RS05050 HMPREF1078_RS05055: HMPREF1078_RS05055 - glucose 1-dehydrogenase, at 273,936 to 274,784 _RS05055 HMPREF1078_RS05060: HMPREF1078_RS05060 - DoxX family protein, at 274,799 to 275,401 _RS05060
Locus Name Description Strand Phenotype
HMPREF1078_RS05010 HMPREF1078_RS05010 RNA polymerase sigma-70 factor - insig.
HMPREF1078_RS05015 HMPREF1078_RS05015 PfkB family carbohydrate kinase + insig.
HMPREF1078_RS05020 HMPREF1078_RS05020 sugar MFS transporter - cofit
HMPREF1078_RS05025 HMPREF1078_RS05025 PAS domain-containing sensor histidine kinase - cofit
HMPREF1078_RS05030 HMPREF1078_RS05030 acyltransferase - insig.
HMPREF1078_RS05035 HMPREF1078_RS05035 site-specific integrase + insig.
HMPREF1078_RS05040 HMPREF1078_RS05040 PDDEXK nuclease domain-containing protein + insig.
HMPREF1078_RS05045 HMPREF1078_RS05045 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS05050 HMPREF1078_RS05050 glucose 1-dehydrogenase + insig.
HMPREF1078_RS05055 HMPREF1078_RS05055 glucose 1-dehydrogenase + insig.
HMPREF1078_RS05060 HMPREF1078_RS05060 DoxX family protein + insig.

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