Gene info for HMPREF1078_RS04965 in Parabacteroides merdae CL09T00C40

Annotation: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 248,392 to 249,678
See nucleotide sequence around HMPREF1078_RS04965 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS19520 and HMPREF1078_RS04945 are separated by 265 nucleotidesHMPREF1078_RS04945 and HMPREF1078_RS04950 are separated by 85 nucleotidesHMPREF1078_RS04950 and HMPREF1078_RS04955 are separated by 132 nucleotidesHMPREF1078_RS04955 and HMPREF1078_RS04960 are separated by 4 nucleotidesHMPREF1078_RS04960 and HMPREF1078_RS04965 are separated by 96 nucleotidesHMPREF1078_RS04965 and HMPREF1078_RS04970 are separated by 763 nucleotidesHMPREF1078_RS04970 and HMPREF1078_RS04975 are separated by 322 nucleotidesHMPREF1078_RS04975 and HMPREF1078_RS04980 overlap by 4 nucleotidesHMPREF1078_RS04980 and HMPREF1078_RS19770 overlap by 13 nucleotidesHMPREF1078_RS19770 and HMPREF1078_RS19335 are separated by 19 nucleotides HMPREF1078_RS19520: HMPREF1078_RS19520 - hypothetical protein, at 243,718 to 243,948 _RS19520 HMPREF1078_RS04945: HMPREF1078_RS04945 - acetate kinase, at 244,214 to 245,413 _RS04945 HMPREF1078_RS04950: HMPREF1078_RS04950 - phosphate acetyltransferase, at 245,499 to 246,512 _RS04950 HMPREF1078_RS04955: HMPREF1078_RS04955 - diadenylate cyclase CdaA, at 246,645 to 247,430 _RS04955 HMPREF1078_RS04960: HMPREF1078_RS04960 - dihydropteroate synthase, at 247,435 to 248,295 _RS04960 HMPREF1078_RS04965: HMPREF1078_RS04965 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase, at 248,392 to 249,678 _RS04965 HMPREF1078_RS04970: HMPREF1078_RS04970 - alpha/beta hydrolase, at 250,442 to 251,704 _RS04970 HMPREF1078_RS04975: HMPREF1078_RS04975 - IS1595 family transposase, at 252,027 to 252,944 _RS04975 HMPREF1078_RS04980: HMPREF1078_RS04980 - hypothetical protein, at 252,941 to 253,246 _RS04980 HMPREF1078_RS19770: HMPREF1078_RS19770 - hypothetical protein, at 253,234 to 253,401 _RS19770 HMPREF1078_RS19335: HMPREF1078_RS19335 - hypothetical protein, at 253,421 to 253,654 _RS19335
Locus Name Description Strand Phenotype
HMPREF1078_RS19520 HMPREF1078_RS19520 hypothetical protein - insig.
HMPREF1078_RS04945 HMPREF1078_RS04945 acetate kinase - no data
HMPREF1078_RS04950 HMPREF1078_RS04950 phosphate acetyltransferase - no data
HMPREF1078_RS04955 HMPREF1078_RS04955 diadenylate cyclase CdaA - no data
HMPREF1078_RS04960 HMPREF1078_RS04960 dihydropteroate synthase - no data
HMPREF1078_RS04965 HMPREF1078_RS04965 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase + no data
HMPREF1078_RS04970 HMPREF1078_RS04970 alpha/beta hydrolase - insig.
HMPREF1078_RS04975 HMPREF1078_RS04975 IS1595 family transposase + insig.
HMPREF1078_RS04980 HMPREF1078_RS04980 hypothetical protein + strong
HMPREF1078_RS19770 HMPREF1078_RS19770 hypothetical protein - sig.
HMPREF1078_RS19335 HMPREF1078_RS19335 hypothetical protein + insig.

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