Gene info for HMPREF1078_RS04910 in Parabacteroides merdae CL09T00C40

Annotation: RNA polymerase sigma-70 factor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 238,336 to 238,878
See nucleotide sequence around HMPREF1078_RS04910 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04885 and HMPREF1078_RS04890 are separated by 56 nucleotidesHMPREF1078_RS04890 and HMPREF1078_RS04895 are separated by 18 nucleotidesHMPREF1078_RS04895 and HMPREF1078_RS04900 overlap by 32 nucleotidesHMPREF1078_RS04900 and HMPREF1078_RS04905 are separated by 114 nucleotidesHMPREF1078_RS04905 and HMPREF1078_RS04910 are separated by 154 nucleotidesHMPREF1078_RS04910 and HMPREF1078_RS04915 are separated by 928 nucleotidesHMPREF1078_RS04915 and HMPREF1078_RS04920 overlap by 8 nucleotidesHMPREF1078_RS04920 and HMPREF1078_RS04925 are separated by 190 nucleotidesHMPREF1078_RS04925 and HMPREF1078_RS04930 are separated by 85 nucleotidesHMPREF1078_RS04930 and HMPREF1078_RS04935 are separated by 154 nucleotides HMPREF1078_RS04885: HMPREF1078_RS04885 - magnesium transporter, at 230,499 to 231,848 _RS04885 HMPREF1078_RS04890: HMPREF1078_RS04890 - RagB/SusD family nutrient uptake outer membrane protein, at 231,905 to 233,563 _RS04890 HMPREF1078_RS04895: HMPREF1078_RS04895 - TonB-dependent receptor, at 233,582 to 236,482 _RS04895 HMPREF1078_RS04900: HMPREF1078_RS04900 - STN domain-containing protein, at 236,451 to 236,885 _RS04900 HMPREF1078_RS04905: HMPREF1078_RS04905 - FecR family protein, at 237,000 to 238,181 _RS04905 HMPREF1078_RS04910: HMPREF1078_RS04910 - RNA polymerase sigma-70 factor, at 238,336 to 238,878 _RS04910 HMPREF1078_RS04915: HMPREF1078_RS04915 - CidA/LrgA family protein, at 239,807 to 240,157 _RS04915 HMPREF1078_RS04920: HMPREF1078_RS04920 - LrgB family protein, at 240,150 to 240,848 _RS04920 HMPREF1078_RS04925: HMPREF1078_RS04925 - elongation factor P, at 241,039 to 241,602 _RS04925 HMPREF1078_RS04930: HMPREF1078_RS04930 - DNA repair protein RadC, at 241,688 to 242,368 _RS04930 HMPREF1078_RS04935: HMPREF1078_RS04935 - iron-sulfur cluster assembly protein, at 242,523 to 242,840 _RS04935
Locus Name Description Strand Phenotype
HMPREF1078_RS04885 HMPREF1078_RS04885 magnesium transporter + insig.
HMPREF1078_RS04890 HMPREF1078_RS04890 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS04895 HMPREF1078_RS04895 TonB-dependent receptor - insig.
HMPREF1078_RS04900 HMPREF1078_RS04900 STN domain-containing protein - insig.
HMPREF1078_RS04905 HMPREF1078_RS04905 FecR family protein - cofit
HMPREF1078_RS04910 HMPREF1078_RS04910 RNA polymerase sigma-70 factor - insig.
HMPREF1078_RS04915 HMPREF1078_RS04915 CidA/LrgA family protein + cofit
HMPREF1078_RS04920 HMPREF1078_RS04920 LrgB family protein + insig.
HMPREF1078_RS04925 HMPREF1078_RS04925 elongation factor P + strong
HMPREF1078_RS04930 HMPREF1078_RS04930 DNA repair protein RadC + insig.
HMPREF1078_RS04935 HMPREF1078_RS04935 iron-sulfur cluster assembly protein + cofit

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