Gene info for HMPREF1078_RS04540 in Parabacteroides merdae CL09T00C40

Annotation: lipid-A-disaccharide synthase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 140,752 to 141,885
See nucleotide sequence around HMPREF1078_RS04540 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04515 and HMPREF1078_RS04520 are separated by 89 nucleotidesHMPREF1078_RS04520 and HMPREF1078_RS04525 are separated by 36 nucleotidesHMPREF1078_RS04525 and HMPREF1078_RS04530 overlap by 8 nucleotidesHMPREF1078_RS04530 and HMPREF1078_RS04535 are separated by 220 nucleotidesHMPREF1078_RS04535 and HMPREF1078_RS04540 are separated by 88 nucleotidesHMPREF1078_RS04540 and HMPREF1078_RS04545 are separated by 104 nucleotidesHMPREF1078_RS04545 and HMPREF1078_RS04550 are separated by 126 nucleotidesHMPREF1078_RS04550 and HMPREF1078_RS04555 are separated by 2 nucleotidesHMPREF1078_RS04555 and HMPREF1078_RS04560 are separated by 315 nucleotidesHMPREF1078_RS04560 and HMPREF1078_RS04565 are separated by 13 nucleotides HMPREF1078_RS04515: HMPREF1078_RS04515 - DUF1080 domain-containing protein, at 136,502 to 137,356 _RS04515 HMPREF1078_RS04520: HMPREF1078_RS04520 - hypothetical protein, at 137,446 to 138,585 _RS04520 HMPREF1078_RS04525: HMPREF1078_RS04525 - hypothetical protein, at 138,622 to 139,173 _RS04525 HMPREF1078_RS04530: HMPREF1078_RS04530 - sigma-70 family RNA polymerase sigma factor, at 139,166 to 139,708 _RS04530 HMPREF1078_RS04535: HMPREF1078_RS04535 - NigD-like protein, at 139,929 to 140,663 _RS04535 HMPREF1078_RS04540: HMPREF1078_RS04540 - lipid-A-disaccharide synthase, at 140,752 to 141,885 _RS04540 HMPREF1078_RS04545: HMPREF1078_RS04545 - 5'/3'-nucleotidase SurE, at 141,990 to 142,766 _RS04545 HMPREF1078_RS04550: HMPREF1078_RS04550 - response regulator transcription factor, at 142,893 to 143,624 _RS04550 HMPREF1078_RS04555: HMPREF1078_RS04555 - HAMP domain-containing sensor histidine kinase, at 143,627 to 145,180 _RS04555 HMPREF1078_RS04560: HMPREF1078_RS04560 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 145,496 to 146,320 _RS04560 HMPREF1078_RS04565: HMPREF1078_RS04565 - GNAT family N-acetyltransferase, at 146,334 to 147,299 _RS04565
Locus Name Description Strand Phenotype
HMPREF1078_RS04515 HMPREF1078_RS04515 DUF1080 domain-containing protein + strong
HMPREF1078_RS04520 HMPREF1078_RS04520 hypothetical protein - strong
HMPREF1078_RS04525 HMPREF1078_RS04525 hypothetical protein - strong
HMPREF1078_RS04530 HMPREF1078_RS04530 sigma-70 family RNA polymerase sigma factor - insig.
HMPREF1078_RS04535 HMPREF1078_RS04535 NigD-like protein - strong
HMPREF1078_RS04540 HMPREF1078_RS04540 lipid-A-disaccharide synthase - no data
HMPREF1078_RS04545 HMPREF1078_RS04545 5'/3'-nucleotidase SurE - insig.
HMPREF1078_RS04550 HMPREF1078_RS04550 response regulator transcription factor - no data
HMPREF1078_RS04555 HMPREF1078_RS04555 HAMP domain-containing sensor histidine kinase - strong
HMPREF1078_RS04560 HMPREF1078_RS04560 1-acyl-sn-glycerol-3-phosphate acyltransferase + strong
HMPREF1078_RS04565 HMPREF1078_RS04565 GNAT family N-acetyltransferase + strong

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