Gene info for HMPREF1078_RS04490 in Parabacteroides merdae CL09T00C40

Annotation: ribonuclease Z
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 130,542 to 131,456
See nucleotide sequence around HMPREF1078_RS04490 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04465 and HMPREF1078_RS04470 are separated by 81 nucleotidesHMPREF1078_RS04470 and HMPREF1078_RS04475 are separated by 73 nucleotidesHMPREF1078_RS04475 and HMPREF1078_RS04480 are separated by 15 nucleotidesHMPREF1078_RS04480 and HMPREF1078_RS04485 are separated by 7 nucleotidesHMPREF1078_RS04485 and HMPREF1078_RS04490 are separated by 126 nucleotidesHMPREF1078_RS04490 and HMPREF1078_RS04495 are separated by 283 nucleotidesHMPREF1078_RS04495 and HMPREF1078_RS04500 are separated by 33 nucleotidesHMPREF1078_RS04500 and HMPREF1078_RS04505 are separated by 12 nucleotidesHMPREF1078_RS04505 and HMPREF1078_RS04510 are separated by 287 nucleotidesHMPREF1078_RS04510 and HMPREF1078_RS04515 are separated by 23 nucleotides HMPREF1078_RS04465: HMPREF1078_RS04465 - HU family DNA-binding protein, at 128,389 to 128,835 _RS04465 HMPREF1078_RS04470: HMPREF1078_RS04470 - DUF4248 domain-containing protein, at 128,917 to 129,141 _RS04470 HMPREF1078_RS04475: HMPREF1078_RS04475 - glucosaminidase domain-containing protein, at 129,215 to 129,715 _RS04475 HMPREF1078_RS04480: HMPREF1078_RS04480 - hypothetical protein, at 129,731 to 130,078 _RS04480 HMPREF1078_RS04485: HMPREF1078_RS04485 - T9SS type A sorting domain-containing protein, at 130,086 to 130,415 _RS04485 HMPREF1078_RS04490: HMPREF1078_RS04490 - ribonuclease Z, at 130,542 to 131,456 _RS04490 HMPREF1078_RS04495: HMPREF1078_RS04495 - cytochrome d ubiquinol oxidase subunit II, at 131,740 to 132,894 _RS04495 HMPREF1078_RS04500: HMPREF1078_RS04500 - cytochrome ubiquinol oxidase subunit I, at 132,928 to 134,478 _RS04500 HMPREF1078_RS04505: HMPREF1078_RS04505 - DUF4492 domain-containing protein, at 134,491 to 134,718 _RS04505 HMPREF1078_RS04510: HMPREF1078_RS04510 - Gfo/Idh/MocA family oxidoreductase, at 135,006 to 136,478 _RS04510 HMPREF1078_RS04515: HMPREF1078_RS04515 - DUF1080 domain-containing protein, at 136,502 to 137,356 _RS04515
Locus Name Description Strand Phenotype
HMPREF1078_RS04465 HMPREF1078_RS04465 HU family DNA-binding protein + insig.
HMPREF1078_RS04470 HMPREF1078_RS04470 DUF4248 domain-containing protein - insig.
HMPREF1078_RS04475 HMPREF1078_RS04475 glucosaminidase domain-containing protein + insig.
HMPREF1078_RS04480 HMPREF1078_RS04480 hypothetical protein + insig.
HMPREF1078_RS04485 HMPREF1078_RS04485 T9SS type A sorting domain-containing protein - strong
HMPREF1078_RS04490 HMPREF1078_RS04490 ribonuclease Z - insig.
HMPREF1078_RS04495 HMPREF1078_RS04495 cytochrome d ubiquinol oxidase subunit II - cofit
HMPREF1078_RS04500 HMPREF1078_RS04500 cytochrome ubiquinol oxidase subunit I - strong
HMPREF1078_RS04505 HMPREF1078_RS04505 DUF4492 domain-containing protein - insig.
HMPREF1078_RS04510 HMPREF1078_RS04510 Gfo/Idh/MocA family oxidoreductase + strong
HMPREF1078_RS04515 HMPREF1078_RS04515 DUF1080 domain-containing protein + strong

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