Gene info for HMPREF1078_RS04440 in Parabacteroides merdae CL09T00C40

Annotation: AAA family ATPase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 119,791 to 120,555
See nucleotide sequence around HMPREF1078_RS04440 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04415 and HMPREF1078_RS04420 are separated by 94 nucleotidesHMPREF1078_RS04420 and HMPREF1078_RS04425 are separated by 85 nucleotidesHMPREF1078_RS04425 and HMPREF1078_RS04430 are separated by 4 nucleotidesHMPREF1078_RS04430 and HMPREF1078_RS04435 overlap by 4 nucleotidesHMPREF1078_RS04435 and HMPREF1078_RS04440 are separated by 79 nucleotidesHMPREF1078_RS04440 and HMPREF1078_RS04445 are separated by 189 nucleotidesHMPREF1078_RS04445 and HMPREF1078_RS04450 are separated by 693 nucleotidesHMPREF1078_RS04450 and HMPREF1078_RS04455 are separated by 361 nucleotidesHMPREF1078_RS04455 and HMPREF1078_RS04460 are separated by 185 nucleotidesHMPREF1078_RS04460 and HMPREF1078_RS04465 are separated by 309 nucleotides HMPREF1078_RS04415: HMPREF1078_RS04415 - DUF3127 domain-containing protein, at 113,644 to 114,039 _RS04415 HMPREF1078_RS04420: HMPREF1078_RS04420 - RelA/SpoT family protein, at 114,134 to 116,428 _RS04420 HMPREF1078_RS04425: HMPREF1078_RS04425 - lytic transglycosylase domain-containing protein, at 116,514 to 118,064 _RS04425 HMPREF1078_RS04430: HMPREF1078_RS04430 - DUF5683 domain-containing protein, at 118,069 to 118,827 _RS04430 HMPREF1078_RS04435: HMPREF1078_RS04435 - ParB/RepB/Spo0J family partition protein, at 118,824 to 119,711 _RS04435 HMPREF1078_RS04440: HMPREF1078_RS04440 - AAA family ATPase, at 119,791 to 120,555 _RS04440 HMPREF1078_RS04445: HMPREF1078_RS04445 - putative toxin-antitoxin system toxin component, PIN family, at 120,745 to 121,053 _RS04445 HMPREF1078_RS04450: HMPREF1078_RS04450 - DUF6383 domain-containing protein, at 121,747 to 124,929 _RS04450 HMPREF1078_RS04455: HMPREF1078_RS04455 - hypothetical protein, at 125,291 to 125,626 _RS04455 HMPREF1078_RS04460: HMPREF1078_RS04460 - DUF3987 domain-containing protein, at 125,812 to 128,079 _RS04460 HMPREF1078_RS04465: HMPREF1078_RS04465 - HU family DNA-binding protein, at 128,389 to 128,835 _RS04465
Locus Name Description Strand Phenotype
HMPREF1078_RS04415 HMPREF1078_RS04415 DUF3127 domain-containing protein + strong
HMPREF1078_RS04420 HMPREF1078_RS04420 RelA/SpoT family protein - strong
HMPREF1078_RS04425 HMPREF1078_RS04425 lytic transglycosylase domain-containing protein - cofit
HMPREF1078_RS04430 HMPREF1078_RS04430 DUF5683 domain-containing protein - no data
HMPREF1078_RS04435 HMPREF1078_RS04435 ParB/RepB/Spo0J family partition protein - strong
HMPREF1078_RS04440 HMPREF1078_RS04440 AAA family ATPase - strong
HMPREF1078_RS04445 HMPREF1078_RS04445 putative toxin-antitoxin system toxin component, PIN family - insig.
HMPREF1078_RS04450 HMPREF1078_RS04450 DUF6383 domain-containing protein + insig.
HMPREF1078_RS04455 HMPREF1078_RS04455 hypothetical protein + insig.
HMPREF1078_RS04460 HMPREF1078_RS04460 DUF3987 domain-containing protein + insig.
HMPREF1078_RS04465 HMPREF1078_RS04465 HU family DNA-binding protein + insig.

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