Gene info for HMPREF1078_RS04415 in Parabacteroides merdae CL09T00C40

Annotation: DUF3127 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 113,644 to 114,039
See nucleotide sequence around HMPREF1078_RS04415 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04390 and HMPREF1078_RS04395 are separated by 36 nucleotidesHMPREF1078_RS04395 and HMPREF1078_RS04400 are separated by 170 nucleotidesHMPREF1078_RS04400 and HMPREF1078_RS04405 are separated by 97 nucleotidesHMPREF1078_RS04405 and HMPREF1078_RS04410 are separated by 15 nucleotidesHMPREF1078_RS04410 and HMPREF1078_RS04415 are separated by 87 nucleotidesHMPREF1078_RS04415 and HMPREF1078_RS04420 are separated by 94 nucleotidesHMPREF1078_RS04420 and HMPREF1078_RS04425 are separated by 85 nucleotidesHMPREF1078_RS04425 and HMPREF1078_RS04430 are separated by 4 nucleotidesHMPREF1078_RS04430 and HMPREF1078_RS04435 overlap by 4 nucleotidesHMPREF1078_RS04435 and HMPREF1078_RS04440 are separated by 79 nucleotides HMPREF1078_RS04390: HMPREF1078_RS04390 - tRNA-Pro, at 108,130 to 108,204 _RS04390 HMPREF1078_RS04395: HMPREF1078_RS04395 - 3-dehydroquinate synthase, at 108,241 to 109,305 _RS04395 HMPREF1078_RS04400: HMPREF1078_RS04400 - alanine--tRNA ligase, at 109,476 to 112,103 _RS04400 HMPREF1078_RS04405: HMPREF1078_RS04405 - M23 family metallopeptidase, at 112,201 to 113,184 _RS04405 HMPREF1078_RS04410: HMPREF1078_RS04410 - MerR family transcriptional regulator, at 113,200 to 113,556 _RS04410 HMPREF1078_RS04415: HMPREF1078_RS04415 - DUF3127 domain-containing protein, at 113,644 to 114,039 _RS04415 HMPREF1078_RS04420: HMPREF1078_RS04420 - RelA/SpoT family protein, at 114,134 to 116,428 _RS04420 HMPREF1078_RS04425: HMPREF1078_RS04425 - lytic transglycosylase domain-containing protein, at 116,514 to 118,064 _RS04425 HMPREF1078_RS04430: HMPREF1078_RS04430 - DUF5683 domain-containing protein, at 118,069 to 118,827 _RS04430 HMPREF1078_RS04435: HMPREF1078_RS04435 - ParB/RepB/Spo0J family partition protein, at 118,824 to 119,711 _RS04435 HMPREF1078_RS04440: HMPREF1078_RS04440 - AAA family ATPase, at 119,791 to 120,555 _RS04440
Locus Name Description Strand Phenotype
HMPREF1078_RS04390 HMPREF1078_RS04390 tRNA-Pro - insig.
HMPREF1078_RS04395 HMPREF1078_RS04395 3-dehydroquinate synthase - cofit
HMPREF1078_RS04400 HMPREF1078_RS04400 alanine--tRNA ligase - no data
HMPREF1078_RS04405 HMPREF1078_RS04405 M23 family metallopeptidase + strong
HMPREF1078_RS04410 HMPREF1078_RS04410 MerR family transcriptional regulator + no data
HMPREF1078_RS04415 HMPREF1078_RS04415 DUF3127 domain-containing protein + strong
HMPREF1078_RS04420 HMPREF1078_RS04420 RelA/SpoT family protein - strong
HMPREF1078_RS04425 HMPREF1078_RS04425 lytic transglycosylase domain-containing protein - insig.
HMPREF1078_RS04430 HMPREF1078_RS04430 DUF5683 domain-containing protein - no data
HMPREF1078_RS04435 HMPREF1078_RS04435 ParB/RepB/Spo0J family partition protein - strong
HMPREF1078_RS04440 HMPREF1078_RS04440 AAA family ATPase - strong

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