Gene info for HMPREF1078_RS04165 in Parabacteroides merdae CL09T00C40

Annotation: MBL fold metallo-hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 46,712 to 47,563
See nucleotide sequence around HMPREF1078_RS04165 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04140 and HMPREF1078_RS04145 are separated by 25 nucleotidesHMPREF1078_RS04145 and HMPREF1078_RS04150 are separated by 11 nucleotidesHMPREF1078_RS04150 and HMPREF1078_RS04155 are separated by 6 nucleotidesHMPREF1078_RS04155 and HMPREF1078_RS04160 overlap by 4 nucleotidesHMPREF1078_RS04160 and HMPREF1078_RS04165 are separated by 98 nucleotidesHMPREF1078_RS04165 and HMPREF1078_RS04170 are separated by 178 nucleotidesHMPREF1078_RS04170 and HMPREF1078_RS04175 are separated by 37 nucleotidesHMPREF1078_RS04175 and HMPREF1078_RS04180 are separated by 119 nucleotidesHMPREF1078_RS04180 and HMPREF1078_RS04185 are separated by 255 nucleotidesHMPREF1078_RS04185 and HMPREF1078_RS04200 are separated by 1519 nucleotides HMPREF1078_RS04140: HMPREF1078_RS04140 - cellulose synthase subunit BcsC-related outer membrane protein, at 42,166 to 42,651 _RS04140 HMPREF1078_RS04145: HMPREF1078_RS04145 - peptide chain release factor 3, at 42,677 to 44,257 _RS04145 HMPREF1078_RS04150: HMPREF1078_RS04150 - dTDP-4-dehydrorhamnose reductase, at 44,269 to 45,135 _RS04150 HMPREF1078_RS04155: HMPREF1078_RS04155 - DUF4924 family protein, at 45,142 to 45,690 _RS04155 HMPREF1078_RS04160: HMPREF1078_RS04160 - Mur ligase family protein, at 45,687 to 46,613 _RS04160 HMPREF1078_RS04165: HMPREF1078_RS04165 - MBL fold metallo-hydrolase, at 46,712 to 47,563 _RS04165 HMPREF1078_RS04170: HMPREF1078_RS04170 - Dabb family protein, at 47,742 to 48,128 _RS04170 HMPREF1078_RS04175: HMPREF1078_RS04175 - glycoside hydrolase family 20 protein, at 48,166 to 50,490 _RS04175 HMPREF1078_RS04180: HMPREF1078_RS04180 - prolyl oligopeptidase family serine peptidase, at 50,610 to 53,078 _RS04180 HMPREF1078_RS04185: HMPREF1078_RS04185 - DUF6383 domain-containing protein, at 53,334 to 57,605 _RS04185 HMPREF1078_RS04200: HMPREF1078_RS04200 - alkyl hydroperoxide reductase subunit F, at 59,125 to 60,690 _RS04200
Locus Name Description Strand Phenotype
HMPREF1078_RS04140 HMPREF1078_RS04140 cellulose synthase subunit BcsC-related outer membrane protein - insig.
HMPREF1078_RS04145 HMPREF1078_RS04145 peptide chain release factor 3 - cofit
HMPREF1078_RS04150 HMPREF1078_RS04150 dTDP-4-dehydrorhamnose reductase - no data
HMPREF1078_RS04155 HMPREF1078_RS04155 DUF4924 family protein - cofit
HMPREF1078_RS04160 HMPREF1078_RS04160 Mur ligase family protein - strong
HMPREF1078_RS04165 HMPREF1078_RS04165 MBL fold metallo-hydrolase + insig.
HMPREF1078_RS04170 HMPREF1078_RS04170 Dabb family protein + insig.
HMPREF1078_RS04175 HMPREF1078_RS04175 glycoside hydrolase family 20 protein + insig.
HMPREF1078_RS04180 HMPREF1078_RS04180 prolyl oligopeptidase family serine peptidase + insig.
HMPREF1078_RS04185 HMPREF1078_RS04185 DUF6383 domain-containing protein - insig.
HMPREF1078_RS04200 HMPREF1078_RS04200 alkyl hydroperoxide reductase subunit F - insig.

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