Gene info for HMPREF1078_RS04140 in Parabacteroides merdae CL09T00C40

Annotation: cellulose synthase subunit BcsC-related outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 42,166 to 42,651
See nucleotide sequence around HMPREF1078_RS04140 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04115 and HMPREF1078_RS04120 are separated by 441 nucleotidesHMPREF1078_RS04120 and HMPREF1078_RS04125 are separated by 82 nucleotidesHMPREF1078_RS04125 and HMPREF1078_RS04130 are separated by 18 nucleotidesHMPREF1078_RS04130 and HMPREF1078_RS04135 overlap by 1 nucleotidesHMPREF1078_RS04135 and HMPREF1078_RS04140 are separated by 81 nucleotidesHMPREF1078_RS04140 and HMPREF1078_RS04145 are separated by 25 nucleotidesHMPREF1078_RS04145 and HMPREF1078_RS04150 are separated by 11 nucleotidesHMPREF1078_RS04150 and HMPREF1078_RS04155 are separated by 6 nucleotidesHMPREF1078_RS04155 and HMPREF1078_RS04160 overlap by 4 nucleotidesHMPREF1078_RS04160 and HMPREF1078_RS04165 are separated by 98 nucleotides HMPREF1078_RS04115: HMPREF1078_RS04115 - AAA family ATPase, at 37,144 to 38,571 _RS04115 HMPREF1078_RS04120: HMPREF1078_RS04120 - hypothetical protein, at 39,013 to 39,714 _RS04120 HMPREF1078_RS04125: HMPREF1078_RS04125 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 39,797 to 40,501 _RS04125 HMPREF1078_RS04130: HMPREF1078_RS04130 - hypothetical protein, at 40,520 to 41,392 _RS04130 HMPREF1078_RS04135: HMPREF1078_RS04135 - YjjG family noncanonical pyrimidine nucleotidase, at 41,392 to 42,084 _RS04135 HMPREF1078_RS04140: HMPREF1078_RS04140 - cellulose synthase subunit BcsC-related outer membrane protein, at 42,166 to 42,651 _RS04140 HMPREF1078_RS04145: HMPREF1078_RS04145 - peptide chain release factor 3, at 42,677 to 44,257 _RS04145 HMPREF1078_RS04150: HMPREF1078_RS04150 - dTDP-4-dehydrorhamnose reductase, at 44,269 to 45,135 _RS04150 HMPREF1078_RS04155: HMPREF1078_RS04155 - DUF4924 family protein, at 45,142 to 45,690 _RS04155 HMPREF1078_RS04160: HMPREF1078_RS04160 - Mur ligase family protein, at 45,687 to 46,613 _RS04160 HMPREF1078_RS04165: HMPREF1078_RS04165 - MBL fold metallo-hydrolase, at 46,712 to 47,563 _RS04165
Locus Name Description Strand Phenotype
HMPREF1078_RS04115 HMPREF1078_RS04115 AAA family ATPase + insig.
HMPREF1078_RS04120 HMPREF1078_RS04120 hypothetical protein + strong
HMPREF1078_RS04125 HMPREF1078_RS04125 16S rRNA (cytidine(1402)-2'-O)-methyltransferase + strong
HMPREF1078_RS04130 HMPREF1078_RS04130 hypothetical protein + strong
HMPREF1078_RS04135 HMPREF1078_RS04135 YjjG family noncanonical pyrimidine nucleotidase + insig.
HMPREF1078_RS04140 HMPREF1078_RS04140 cellulose synthase subunit BcsC-related outer membrane protein - insig.
HMPREF1078_RS04145 HMPREF1078_RS04145 peptide chain release factor 3 - cofit
HMPREF1078_RS04150 HMPREF1078_RS04150 dTDP-4-dehydrorhamnose reductase - no data
HMPREF1078_RS04155 HMPREF1078_RS04155 DUF4924 family protein - cofit
HMPREF1078_RS04160 HMPREF1078_RS04160 Mur ligase family protein - strong
HMPREF1078_RS04165 HMPREF1078_RS04165 MBL fold metallo-hydrolase + insig.

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