Gene info for HMPREF1078_RS04105 in Parabacteroides merdae CL09T00C40

Annotation: DUF3822 family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 35,585 to 36,412
See nucleotide sequence around HMPREF1078_RS04105 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04080 and HMPREF1078_RS04085 are separated by 296 nucleotidesHMPREF1078_RS04085 and HMPREF1078_RS04090 are separated by 22 nucleotidesHMPREF1078_RS04090 and HMPREF1078_RS04095 are separated by 156 nucleotidesHMPREF1078_RS04095 and HMPREF1078_RS04100 overlap by 29 nucleotidesHMPREF1078_RS04100 and HMPREF1078_RS04105 overlap by 13 nucleotidesHMPREF1078_RS04105 and HMPREF1078_RS04110 are separated by 8 nucleotidesHMPREF1078_RS04110 and HMPREF1078_RS04115 are separated by 93 nucleotidesHMPREF1078_RS04115 and HMPREF1078_RS04120 are separated by 441 nucleotidesHMPREF1078_RS04120 and HMPREF1078_RS04125 are separated by 82 nucleotidesHMPREF1078_RS04125 and HMPREF1078_RS04130 are separated by 18 nucleotides HMPREF1078_RS04080: HMPREF1078_RS04080 - RNA polymerase sigma-70 factor, at 29,231 to 29,785 _RS04080 HMPREF1078_RS04085: HMPREF1078_RS04085 - TonB-dependent receptor, at 30,082 to 32,850 _RS04085 HMPREF1078_RS04090: HMPREF1078_RS04090 - rhomboid family intramembrane serine protease, at 32,873 to 33,472 _RS04090 HMPREF1078_RS04095: HMPREF1078_RS04095 - cardiolipin synthase, at 33,629 to 35,068 _RS04095 HMPREF1078_RS04100: HMPREF1078_RS04100 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 35,040 to 35,597 _RS04100 HMPREF1078_RS04105: HMPREF1078_RS04105 - DUF3822 family protein, at 35,585 to 36,412 _RS04105 HMPREF1078_RS04110: HMPREF1078_RS04110 - hypothetical protein, at 36,421 to 37,050 _RS04110 HMPREF1078_RS04115: HMPREF1078_RS04115 - AAA family ATPase, at 37,144 to 38,571 _RS04115 HMPREF1078_RS04120: HMPREF1078_RS04120 - hypothetical protein, at 39,013 to 39,714 _RS04120 HMPREF1078_RS04125: HMPREF1078_RS04125 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 39,797 to 40,501 _RS04125 HMPREF1078_RS04130: HMPREF1078_RS04130 - hypothetical protein, at 40,520 to 41,392 _RS04130
Locus Name Description Strand Phenotype
HMPREF1078_RS04080 HMPREF1078_RS04080 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS04085 HMPREF1078_RS04085 TonB-dependent receptor + insig.
HMPREF1078_RS04090 HMPREF1078_RS04090 rhomboid family intramembrane serine protease - insig.
HMPREF1078_RS04095 HMPREF1078_RS04095 cardiolipin synthase + strong
HMPREF1078_RS04100 HMPREF1078_RS04100 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD - cofit
HMPREF1078_RS04105 HMPREF1078_RS04105 DUF3822 family protein - strong
HMPREF1078_RS04110 HMPREF1078_RS04110 hypothetical protein - strong
HMPREF1078_RS04115 HMPREF1078_RS04115 AAA family ATPase + insig.
HMPREF1078_RS04120 HMPREF1078_RS04120 hypothetical protein + strong
HMPREF1078_RS04125 HMPREF1078_RS04125 16S rRNA (cytidine(1402)-2'-O)-methyltransferase + strong
HMPREF1078_RS04130 HMPREF1078_RS04130 hypothetical protein + strong

Or browse nearby genes

Or see the comparative fitness browser