Gene info for HMPREF1078_RS04075 in Parabacteroides merdae CL09T00C40

Annotation: DUF4974 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 27,992 to 29,050
See nucleotide sequence around HMPREF1078_RS04075 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04050 and HMPREF1078_RS04055 are separated by 115 nucleotidesHMPREF1078_RS04055 and HMPREF1078_RS04060 are separated by 15 nucleotidesHMPREF1078_RS04060 and HMPREF1078_RS04065 are separated by 17 nucleotidesHMPREF1078_RS04065 and HMPREF1078_RS04070 are separated by 11 nucleotidesHMPREF1078_RS04070 and HMPREF1078_RS04075 are separated by 156 nucleotidesHMPREF1078_RS04075 and HMPREF1078_RS04080 are separated by 180 nucleotidesHMPREF1078_RS04080 and HMPREF1078_RS04085 are separated by 296 nucleotidesHMPREF1078_RS04085 and HMPREF1078_RS04090 are separated by 22 nucleotidesHMPREF1078_RS04090 and HMPREF1078_RS04095 are separated by 156 nucleotidesHMPREF1078_RS04095 and HMPREF1078_RS04100 overlap by 29 nucleotides HMPREF1078_RS04050: HMPREF1078_RS04050 - alginate lyase family protein, at 18,801 to 20,882 _RS04050 HMPREF1078_RS04055: HMPREF1078_RS04055 - DUF4466 family protein, at 20,998 to 21,990 _RS04055 HMPREF1078_RS04060: HMPREF1078_RS04060 - hypothetical protein, at 22,006 to 22,509 _RS04060 HMPREF1078_RS04065: HMPREF1078_RS04065 - RagB/SusD family nutrient uptake outer membrane protein, at 22,527 to 24,416 _RS04065 HMPREF1078_RS04070: HMPREF1078_RS04070 - TonB-dependent receptor, at 24,428 to 27,835 _RS04070 HMPREF1078_RS04075: HMPREF1078_RS04075 - DUF4974 domain-containing protein, at 27,992 to 29,050 _RS04075 HMPREF1078_RS04080: HMPREF1078_RS04080 - RNA polymerase sigma-70 factor, at 29,231 to 29,785 _RS04080 HMPREF1078_RS04085: HMPREF1078_RS04085 - TonB-dependent receptor, at 30,082 to 32,850 _RS04085 HMPREF1078_RS04090: HMPREF1078_RS04090 - rhomboid family intramembrane serine protease, at 32,873 to 33,472 _RS04090 HMPREF1078_RS04095: HMPREF1078_RS04095 - cardiolipin synthase, at 33,629 to 35,068 _RS04095 HMPREF1078_RS04100: HMPREF1078_RS04100 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 35,040 to 35,597 _RS04100
Locus Name Description Strand Phenotype
HMPREF1078_RS04050 HMPREF1078_RS04050 alginate lyase family protein - insig.
HMPREF1078_RS04055 HMPREF1078_RS04055 DUF4466 family protein - insig.
HMPREF1078_RS04060 HMPREF1078_RS04060 hypothetical protein - insig.
HMPREF1078_RS04065 HMPREF1078_RS04065 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS04070 HMPREF1078_RS04070 TonB-dependent receptor - insig.
HMPREF1078_RS04075 HMPREF1078_RS04075 DUF4974 domain-containing protein - insig.
HMPREF1078_RS04080 HMPREF1078_RS04080 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS04085 HMPREF1078_RS04085 TonB-dependent receptor + insig.
HMPREF1078_RS04090 HMPREF1078_RS04090 rhomboid family intramembrane serine protease - insig.
HMPREF1078_RS04095 HMPREF1078_RS04095 cardiolipin synthase + strong
HMPREF1078_RS04100 HMPREF1078_RS04100 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD - sig.

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