Gene info for HMPREF1078_RS04035 in Parabacteroides merdae CL09T00C40

Annotation: heparinase II/III family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 11,029 to 12,888
See nucleotide sequence around HMPREF1078_RS04035 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS04010 and HMPREF1078_RS04015 are separated by 59 nucleotidesHMPREF1078_RS04015 and HMPREF1078_RS04020 are separated by 124 nucleotidesHMPREF1078_RS04020 and HMPREF1078_RS19755 are separated by 511 nucleotidesHMPREF1078_RS19755 and HMPREF1078_RS04030 are separated by 259 nucleotidesHMPREF1078_RS04030 and HMPREF1078_RS04035 overlap by 4 nucleotidesHMPREF1078_RS04035 and HMPREF1078_RS04040 are separated by 16 nucleotidesHMPREF1078_RS04040 and HMPREF1078_RS04045 are separated by 147 nucleotidesHMPREF1078_RS04045 and HMPREF1078_RS04050 are separated by 7 nucleotidesHMPREF1078_RS04050 and HMPREF1078_RS04055 are separated by 115 nucleotidesHMPREF1078_RS04055 and HMPREF1078_RS04060 are separated by 15 nucleotides HMPREF1078_RS04010: HMPREF1078_RS04010 - DUF1080 domain-containing protein, at 5,484 to 6,773 _RS04010 HMPREF1078_RS04015: HMPREF1078_RS04015 - hypothetical protein, at 6,833 to 7,204 _RS04015 HMPREF1078_RS04020: HMPREF1078_RS04020 - beta-N-acetylhexosaminidase, at 7,329 to 8,927 _RS04020 HMPREF1078_RS19755: HMPREF1078_RS19755 - DUF4248 domain-containing protein, at 9,439 to 9,567 _RS19755 HMPREF1078_RS04030: HMPREF1078_RS04030 - glycoside hydrolase family 88 protein, at 9,827 to 11,032 _RS04030 HMPREF1078_RS04035: HMPREF1078_RS04035 - heparinase II/III family protein, at 11,029 to 12,888 _RS04035 HMPREF1078_RS04040: HMPREF1078_RS04040 - polysaccharide lyase family 8 super-sandwich domain-containing protein, at 12,905 to 15,988 _RS04040 HMPREF1078_RS04045: HMPREF1078_RS04045 - heparinase II/III family protein, at 16,136 to 18,793 _RS04045 HMPREF1078_RS04050: HMPREF1078_RS04050 - alginate lyase family protein, at 18,801 to 20,882 _RS04050 HMPREF1078_RS04055: HMPREF1078_RS04055 - DUF4466 family protein, at 20,998 to 21,990 _RS04055 HMPREF1078_RS04060: HMPREF1078_RS04060 - hypothetical protein, at 22,006 to 22,509 _RS04060
Locus Name Description Strand Phenotype
HMPREF1078_RS04010 HMPREF1078_RS04010 DUF1080 domain-containing protein + insig.
HMPREF1078_RS04015 HMPREF1078_RS04015 hypothetical protein - insig.
HMPREF1078_RS04020 HMPREF1078_RS04020 beta-N-acetylhexosaminidase - insig.
HMPREF1078_RS19755 HMPREF1078_RS19755 DUF4248 domain-containing protein - no data
HMPREF1078_RS04030 HMPREF1078_RS04030 glycoside hydrolase family 88 protein - insig.
HMPREF1078_RS04035 HMPREF1078_RS04035 heparinase II/III family protein - insig.
HMPREF1078_RS04040 HMPREF1078_RS04040 polysaccharide lyase family 8 super-sandwich domain-containing protein - insig.
HMPREF1078_RS04045 HMPREF1078_RS04045 heparinase II/III family protein - insig.
HMPREF1078_RS04050 HMPREF1078_RS04050 alginate lyase family protein - insig.
HMPREF1078_RS04055 HMPREF1078_RS04055 DUF4466 family protein - insig.
HMPREF1078_RS04060 HMPREF1078_RS04060 hypothetical protein - cofit

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