Gene info for HMPREF1078_RS04005 in Parabacteroides merdae CL09T00C40

Annotation: 16S ribosomal RNA
Type 2: 23S (large subunit) ribosomal RNA
Located on scaffold NZ_JH976525, - strand, nucleotides 3,384 to 4,914
See nucleotide sequence around HMPREF1078_RS04005 or for all of scaffold NZ_JH976525

Nearby Genes

500 ntHMPREF1078_RS03990 and HMPREF1078_RS03995 are separated by 149 nucleotidesHMPREF1078_RS03995 and HMPREF1078_RS04000 are separated by 10 nucleotidesHMPREF1078_RS04000 and HMPREF1078_RS04005 are separated by 155 nucleotidesHMPREF1078_RS04005 and HMPREF1078_RS04010 are separated by 569 nucleotidesHMPREF1078_RS04010 and HMPREF1078_RS04015 are separated by 59 nucleotidesHMPREF1078_RS04015 and HMPREF1078_RS04020 are separated by 124 nucleotidesHMPREF1078_RS04020 and HMPREF1078_RS19755 are separated by 511 nucleotidesHMPREF1078_RS19755 and HMPREF1078_RS04030 are separated by 259 nucleotides HMPREF1078_RS03990: HMPREF1078_RS03990 - 23S ribosomal RNA, at 43 to 2,918 _RS03990 HMPREF1078_RS03995: HMPREF1078_RS03995 - tRNA-Ala, at 3,068 to 3,141 _RS03995 HMPREF1078_RS04000: HMPREF1078_RS04000 - tRNA-Ile, at 3,152 to 3,228 _RS04000 HMPREF1078_RS04005: HMPREF1078_RS04005 - 16S ribosomal RNA, at 3,384 to 4,914 _RS04005 HMPREF1078_RS04010: HMPREF1078_RS04010 - DUF1080 domain-containing protein, at 5,484 to 6,773 _RS04010 HMPREF1078_RS04015: HMPREF1078_RS04015 - hypothetical protein, at 6,833 to 7,204 _RS04015 HMPREF1078_RS04020: HMPREF1078_RS04020 - beta-N-acetylhexosaminidase, at 7,329 to 8,927 _RS04020 HMPREF1078_RS19755: HMPREF1078_RS19755 - DUF4248 domain-containing protein, at 9,439 to 9,567 _RS19755 HMPREF1078_RS04030: HMPREF1078_RS04030 - glycoside hydrolase family 88 protein, at 9,827 to 11,032 _RS04030
Locus Name Description Strand Phenotype
HMPREF1078_RS03990 HMPREF1078_RS03990 23S ribosomal RNA - no data
HMPREF1078_RS03995 HMPREF1078_RS03995 tRNA-Ala - no data
HMPREF1078_RS04000 HMPREF1078_RS04000 tRNA-Ile - no data
HMPREF1078_RS04005 HMPREF1078_RS04005 16S ribosomal RNA - no data
HMPREF1078_RS04010 HMPREF1078_RS04010 DUF1080 domain-containing protein + insig.
HMPREF1078_RS04015 HMPREF1078_RS04015 hypothetical protein - insig.
HMPREF1078_RS04020 HMPREF1078_RS04020 beta-N-acetylhexosaminidase - insig.
HMPREF1078_RS19755 HMPREF1078_RS19755 DUF4248 domain-containing protein - no data
HMPREF1078_RS04030 HMPREF1078_RS04030 glycoside hydrolase family 88 protein - insig.

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