Gene info for HMPREF1078_RS03880 in Parabacteroides merdae CL09T00C40

Annotation: acyltransferase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 907,320 to 907,994
See nucleotide sequence around HMPREF1078_RS03880 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03855 and HMPREF1078_RS03860 overlap by 4 nucleotidesHMPREF1078_RS03860 and HMPREF1078_RS03865 are separated by 10 nucleotidesHMPREF1078_RS03865 and HMPREF1078_RS03870 are separated by 62 nucleotidesHMPREF1078_RS03870 and HMPREF1078_RS03875 are separated by 90 nucleotidesHMPREF1078_RS03875 and HMPREF1078_RS03880 are separated by 48 nucleotidesHMPREF1078_RS03880 and HMPREF1078_RS03885 overlap by 4 nucleotidesHMPREF1078_RS03885 and HMPREF1078_RS03895 are separated by 339 nucleotidesHMPREF1078_RS03895 and HMPREF1078_RS03900 are separated by 12 nucleotidesHMPREF1078_RS03900 and HMPREF1078_RS03905 are separated by 2 nucleotidesHMPREF1078_RS03905 and HMPREF1078_RS19750 are separated by 220 nucleotides HMPREF1078_RS03855: HMPREF1078_RS03855 - GDP-mannose 4,6-dehydratase, at 902,737 to 903,825 _RS03855 HMPREF1078_RS03860: HMPREF1078_RS03860 - WecB/TagA/CpsF family glycosyltransferase, at 903,822 to 904,592 _RS03860 HMPREF1078_RS03865: HMPREF1078_RS03865 - hypothetical protein, at 904,603 to 905,424 _RS03865 HMPREF1078_RS03870: HMPREF1078_RS03870 - hypothetical protein, at 905,487 to 906,044 _RS03870 HMPREF1078_RS03875: HMPREF1078_RS03875 - glycosyltransferase family 4 protein, at 906,135 to 907,271 _RS03875 HMPREF1078_RS03880: HMPREF1078_RS03880 - acyltransferase, at 907,320 to 907,994 _RS03880 HMPREF1078_RS03885: HMPREF1078_RS03885 - DapH/DapD/GlmU-related protein, at 907,991 to 908,260 _RS03885 HMPREF1078_RS03895: HMPREF1078_RS03895 - glycosyltransferase family A protein, at 908,600 to 909,571 _RS03895 HMPREF1078_RS03900: HMPREF1078_RS03900 - O-antigen ligase family protein, at 909,584 to 910,900 _RS03900 HMPREF1078_RS03905: HMPREF1078_RS03905 - glycosyltransferase family 4 protein, at 910,903 to 912,021 _RS03905 HMPREF1078_RS19750: HMPREF1078_RS19750 - hypothetical protein, at 912,242 to 912,487 _RS19750
Locus Name Description Strand Phenotype
HMPREF1078_RS03855 HMPREF1078_RS03855 GDP-mannose 4,6-dehydratase - insig.
HMPREF1078_RS03860 HMPREF1078_RS03860 WecB/TagA/CpsF family glycosyltransferase - cofit
HMPREF1078_RS03865 HMPREF1078_RS03865 hypothetical protein - cofit
HMPREF1078_RS03870 HMPREF1078_RS03870 hypothetical protein - cofit
HMPREF1078_RS03875 HMPREF1078_RS03875 glycosyltransferase family 4 protein - strong
HMPREF1078_RS03880 HMPREF1078_RS03880 acyltransferase - cofit
HMPREF1078_RS03885 HMPREF1078_RS03885 DapH/DapD/GlmU-related protein - cofit
HMPREF1078_RS03895 HMPREF1078_RS03895 glycosyltransferase family A protein - strong
HMPREF1078_RS03900 HMPREF1078_RS03900 O-antigen ligase family protein - cofit
HMPREF1078_RS03905 HMPREF1078_RS03905 glycosyltransferase family 4 protein - cofit
HMPREF1078_RS19750 HMPREF1078_RS19750 hypothetical protein + insig.

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