Gene info for HMPREF1078_RS03855 in Parabacteroides merdae CL09T00C40

Annotation: GDP-mannose 4,6-dehydratase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 902,737 to 903,825
See nucleotide sequence around HMPREF1078_RS03855 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS18440 and HMPREF1078_RS03830 are separated by 86 nucleotidesHMPREF1078_RS03830 and HMPREF1078_RS03840 are separated by 324 nucleotidesHMPREF1078_RS03840 and HMPREF1078_RS03845 are separated by 352 nucleotidesHMPREF1078_RS03845 and HMPREF1078_RS03850 are separated by 19 nucleotidesHMPREF1078_RS03850 and HMPREF1078_RS03855 overlap by 4 nucleotidesHMPREF1078_RS03855 and HMPREF1078_RS03860 overlap by 4 nucleotidesHMPREF1078_RS03860 and HMPREF1078_RS03865 are separated by 10 nucleotidesHMPREF1078_RS03865 and HMPREF1078_RS03870 are separated by 62 nucleotidesHMPREF1078_RS03870 and HMPREF1078_RS03875 are separated by 90 nucleotidesHMPREF1078_RS03875 and HMPREF1078_RS03880 are separated by 48 nucleotides HMPREF1078_RS18440: HMPREF1078_RS18440 - helix-turn-helix domain-containing protein, at 896,751 to 897,282 _RS18440 HMPREF1078_RS03830: HMPREF1078_RS03830 - Helicase associated domain protein, at 897,369 to 899,642 _RS03830 HMPREF1078_RS03840: HMPREF1078_RS03840 - sugar phosphate nucleotidyltransferase, at 899,967 to 901,313 _RS03840 HMPREF1078_RS03845: HMPREF1078_RS03845 - 5S ribosomal RNA, at 901,666 to 901,776 _RS03845 HMPREF1078_RS03850: HMPREF1078_RS03850 - GDP-L-fucose synthase, at 901,796 to 902,740 _RS03850 HMPREF1078_RS03855: HMPREF1078_RS03855 - GDP-mannose 4,6-dehydratase, at 902,737 to 903,825 _RS03855 HMPREF1078_RS03860: HMPREF1078_RS03860 - WecB/TagA/CpsF family glycosyltransferase, at 903,822 to 904,592 _RS03860 HMPREF1078_RS03865: HMPREF1078_RS03865 - hypothetical protein, at 904,603 to 905,424 _RS03865 HMPREF1078_RS03870: HMPREF1078_RS03870 - hypothetical protein, at 905,487 to 906,044 _RS03870 HMPREF1078_RS03875: HMPREF1078_RS03875 - glycosyltransferase family 4 protein, at 906,135 to 907,271 _RS03875 HMPREF1078_RS03880: HMPREF1078_RS03880 - acyltransferase, at 907,320 to 907,994 _RS03880
Locus Name Description Strand Phenotype
HMPREF1078_RS18440 HMPREF1078_RS18440 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS03830 HMPREF1078_RS03830 Helicase associated domain protein - cofit
HMPREF1078_RS03840 HMPREF1078_RS03840 sugar phosphate nucleotidyltransferase - cofit
HMPREF1078_RS03845 HMPREF1078_RS03845 5S ribosomal RNA - insig.
HMPREF1078_RS03850 HMPREF1078_RS03850 GDP-L-fucose synthase - insig.
HMPREF1078_RS03855 HMPREF1078_RS03855 GDP-mannose 4,6-dehydratase - insig.
HMPREF1078_RS03860 HMPREF1078_RS03860 WecB/TagA/CpsF family glycosyltransferase - cofit
HMPREF1078_RS03865 HMPREF1078_RS03865 hypothetical protein - cofit
HMPREF1078_RS03870 HMPREF1078_RS03870 hypothetical protein - cofit
HMPREF1078_RS03875 HMPREF1078_RS03875 glycosyltransferase family 4 protein - strong
HMPREF1078_RS03880 HMPREF1078_RS03880 acyltransferase - cofit

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