Gene info for HMPREF1078_RS03825 in Parabacteroides merdae CL09T00C40

Annotation: IS256 family transposase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 895,509 to 896,765
See nucleotide sequence around HMPREF1078_RS03825 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03800 and HMPREF1078_RS03810 are separated by 2044 nucleotidesHMPREF1078_RS03810 and HMPREF1078_RS19515 overlap by 4 nucleotidesHMPREF1078_RS19515 and HMPREF1078_RS18435 are separated by 436 nucleotidesHMPREF1078_RS18435 and HMPREF1078_RS03820 are separated by 12 nucleotidesHMPREF1078_RS03820 and HMPREF1078_RS03825 are separated by 147 nucleotidesHMPREF1078_RS03825 and HMPREF1078_RS18440 overlap by 15 nucleotidesHMPREF1078_RS18440 and HMPREF1078_RS03830 are separated by 86 nucleotidesHMPREF1078_RS03830 and HMPREF1078_RS03840 are separated by 324 nucleotidesHMPREF1078_RS03840 and HMPREF1078_RS03845 are separated by 352 nucleotidesHMPREF1078_RS03845 and HMPREF1078_RS03850 are separated by 19 nucleotides HMPREF1078_RS03800: HMPREF1078_RS03800 - helix-turn-helix domain-containing protein, at 890,357 to 891,259 _RS03800 HMPREF1078_RS03810: HMPREF1078_RS03810 - amidoligase family protein, at 893,304 to 894,233 _RS03810 HMPREF1078_RS19515: HMPREF1078_RS19515 - hypothetical protein, at 894,230 to 894,463 _RS19515 HMPREF1078_RS18435: HMPREF1078_RS18435 - DNA-binding protein, at 894,900 to 895,055 _RS18435 HMPREF1078_RS03820: HMPREF1078_RS03820 - helix-turn-helix domain-containing protein, at 895,068 to 895,361 _RS03820 HMPREF1078_RS03825: HMPREF1078_RS03825 - IS256 family transposase, at 895,509 to 896,765 _RS03825 HMPREF1078_RS18440: HMPREF1078_RS18440 - helix-turn-helix domain-containing protein, at 896,751 to 897,282 _RS18440 HMPREF1078_RS03830: HMPREF1078_RS03830 - Helicase associated domain protein, at 897,369 to 899,642 _RS03830 HMPREF1078_RS03840: HMPREF1078_RS03840 - sugar phosphate nucleotidyltransferase, at 899,967 to 901,313 _RS03840 HMPREF1078_RS03845: HMPREF1078_RS03845 - 5S ribosomal RNA, at 901,666 to 901,776 _RS03845 HMPREF1078_RS03850: HMPREF1078_RS03850 - GDP-L-fucose synthase, at 901,796 to 902,740 _RS03850
Locus Name Description Strand Phenotype
HMPREF1078_RS03800 HMPREF1078_RS03800 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS03810 HMPREF1078_RS03810 amidoligase family protein + insig.
HMPREF1078_RS19515 HMPREF1078_RS19515 hypothetical protein + insig.
HMPREF1078_RS18435 HMPREF1078_RS18435 DNA-binding protein + cofit
HMPREF1078_RS03820 HMPREF1078_RS03820 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS03825 HMPREF1078_RS03825 IS256 family transposase - no data
HMPREF1078_RS18440 HMPREF1078_RS18440 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS03830 HMPREF1078_RS03830 Helicase associated domain protein - cofit
HMPREF1078_RS03840 HMPREF1078_RS03840 sugar phosphate nucleotidyltransferase - cofit
HMPREF1078_RS03845 HMPREF1078_RS03845 5S ribosomal RNA - insig.
HMPREF1078_RS03850 HMPREF1078_RS03850 GDP-L-fucose synthase - insig.

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