Gene info for HMPREF1078_RS03810 in Parabacteroides merdae CL09T00C40

Annotation: amidoligase family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 893,304 to 894,233
See nucleotide sequence around HMPREF1078_RS03810 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03785 and HMPREF1078_RS19745 are separated by 12 nucleotidesHMPREF1078_RS19745 and HMPREF1078_RS03790 overlap by 100 nucleotidesHMPREF1078_RS03790 and HMPREF1078_RS03795 overlap by 4 nucleotidesHMPREF1078_RS03795 and HMPREF1078_RS03800 are separated by 163 nucleotidesHMPREF1078_RS03800 and HMPREF1078_RS03810 are separated by 2044 nucleotidesHMPREF1078_RS03810 and HMPREF1078_RS19515 overlap by 4 nucleotidesHMPREF1078_RS19515 and HMPREF1078_RS18435 are separated by 436 nucleotidesHMPREF1078_RS18435 and HMPREF1078_RS03820 are separated by 12 nucleotidesHMPREF1078_RS03820 and HMPREF1078_RS03825 are separated by 147 nucleotidesHMPREF1078_RS03825 and HMPREF1078_RS18440 overlap by 15 nucleotides HMPREF1078_RS03785: HMPREF1078_RS03785 - cyclophilin-like fold protein, at 887,766 to 888,824 _RS03785 HMPREF1078_RS19745: HMPREF1078_RS19745 - aldo/keto reductase, at 888,837 to 889,283 _RS19745 HMPREF1078_RS03790: HMPREF1078_RS03790 - aldo/keto reductase, at 889,184 to 889,963 _RS03790 HMPREF1078_RS03795: HMPREF1078_RS03795 - hypothetical protein, at 889,960 to 890,193 _RS03795 HMPREF1078_RS03800: HMPREF1078_RS03800 - helix-turn-helix domain-containing protein, at 890,357 to 891,259 _RS03800 HMPREF1078_RS03810: HMPREF1078_RS03810 - amidoligase family protein, at 893,304 to 894,233 _RS03810 HMPREF1078_RS19515: HMPREF1078_RS19515 - hypothetical protein, at 894,230 to 894,463 _RS19515 HMPREF1078_RS18435: HMPREF1078_RS18435 - DNA-binding protein, at 894,900 to 895,055 _RS18435 HMPREF1078_RS03820: HMPREF1078_RS03820 - helix-turn-helix domain-containing protein, at 895,068 to 895,361 _RS03820 HMPREF1078_RS03825: HMPREF1078_RS03825 - IS256 family transposase, at 895,509 to 896,765 _RS03825 HMPREF1078_RS18440: HMPREF1078_RS18440 - helix-turn-helix domain-containing protein, at 896,751 to 897,282 _RS18440
Locus Name Description Strand Phenotype
HMPREF1078_RS03785 HMPREF1078_RS03785 cyclophilin-like fold protein - insig.
HMPREF1078_RS19745 HMPREF1078_RS19745 aldo/keto reductase - sig.
HMPREF1078_RS03790 HMPREF1078_RS03790 aldo/keto reductase - insig.
HMPREF1078_RS03795 HMPREF1078_RS03795 hypothetical protein - insig.
HMPREF1078_RS03800 HMPREF1078_RS03800 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS03810 HMPREF1078_RS03810 amidoligase family protein + insig.
HMPREF1078_RS19515 HMPREF1078_RS19515 hypothetical protein + insig.
HMPREF1078_RS18435 HMPREF1078_RS18435 DNA-binding protein + insig.
HMPREF1078_RS03820 HMPREF1078_RS03820 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS03825 HMPREF1078_RS03825 IS256 family transposase - no data
HMPREF1078_RS18440 HMPREF1078_RS18440 helix-turn-helix domain-containing protein - insig.

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