Gene info for HMPREF1078_RS03585 in Parabacteroides merdae CL09T00C40

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 845,088 to 846,779
See nucleotide sequence around HMPREF1078_RS03585 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03565 and HMPREF1078_RS20060 are separated by 195 nucleotidesHMPREF1078_RS20060 and HMPREF1078_RS03570 are separated by 495 nucleotidesHMPREF1078_RS03570 and HMPREF1078_RS03575 are separated by 40 nucleotidesHMPREF1078_RS03575 and HMPREF1078_RS03580 are separated by 423 nucleotidesHMPREF1078_RS03580 and HMPREF1078_RS03585 are separated by 18 nucleotidesHMPREF1078_RS03585 and HMPREF1078_RS03590 are separated by 99 nucleotidesHMPREF1078_RS03590 and HMPREF1078_RS03595 overlap by 8 nucleotidesHMPREF1078_RS03595 and HMPREF1078_RS03600 overlap by 29 nucleotidesHMPREF1078_RS03600 and HMPREF1078_RS03605 are separated by 109 nucleotidesHMPREF1078_RS03605 and HMPREF1078_RS03610 are separated by 271 nucleotides HMPREF1078_RS03565: HMPREF1078_RS03565 - glycoside hydrolase family 127 protein, at 837,011 to 838,888 _RS03565 HMPREF1078_RS20060: HMPREF1078_RS20060 - hypothetical protein, at 839,084 to 839,218 _RS20060 HMPREF1078_RS03570: HMPREF1078_RS03570 - RNA polymerase sigma-70 factor, at 839,714 to 840,304 _RS03570 HMPREF1078_RS03575: HMPREF1078_RS03575 - DUF4974 domain-containing protein, at 840,345 to 841,373 _RS03575 HMPREF1078_RS03580: HMPREF1078_RS03580 - TonB-dependent receptor, at 841,797 to 845,069 _RS03580 HMPREF1078_RS03585: HMPREF1078_RS03585 - RagB/SusD family nutrient uptake outer membrane protein, at 845,088 to 846,779 _RS03585 HMPREF1078_RS03590: HMPREF1078_RS03590 - MBOAT family protein, at 846,879 to 848,438 _RS03590 HMPREF1078_RS03595: HMPREF1078_RS03595 - GDSL-type esterase/lipase family protein, at 848,431 to 849,777 _RS03595 HMPREF1078_RS03600: HMPREF1078_RS03600 - hypothetical protein, at 849,749 to 851,197 _RS03600 HMPREF1078_RS03605: HMPREF1078_RS03605 - NUDIX hydrolase, at 851,307 to 851,867 _RS03605 HMPREF1078_RS03610: HMPREF1078_RS03610 - N-acetylmuramoyl-L-alanine amidase, at 852,139 to 853,152 _RS03610
Locus Name Description Strand Phenotype
HMPREF1078_RS03565 HMPREF1078_RS03565 glycoside hydrolase family 127 protein - insig.
HMPREF1078_RS20060 HMPREF1078_RS20060 hypothetical protein + insig.
HMPREF1078_RS03570 HMPREF1078_RS03570 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS03575 HMPREF1078_RS03575 DUF4974 domain-containing protein + insig.
HMPREF1078_RS03580 HMPREF1078_RS03580 TonB-dependent receptor + insig.
HMPREF1078_RS03585 HMPREF1078_RS03585 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS03590 HMPREF1078_RS03590 MBOAT family protein - insig.
HMPREF1078_RS03595 HMPREF1078_RS03595 GDSL-type esterase/lipase family protein - insig.
HMPREF1078_RS03600 HMPREF1078_RS03600 hypothetical protein - insig.
HMPREF1078_RS03605 HMPREF1078_RS03605 NUDIX hydrolase + insig.
HMPREF1078_RS03610 HMPREF1078_RS03610 N-acetylmuramoyl-L-alanine amidase + insig.

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