Gene info for HMPREF1078_RS03550 in Parabacteroides merdae CL09T00C40

Annotation: MalY/PatB family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 832,515 to 833,681
See nucleotide sequence around HMPREF1078_RS03550 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03525 and HMPREF1078_RS19500 are separated by 7 nucleotidesHMPREF1078_RS19500 and HMPREF1078_RS19295 overlap by 38 nucleotidesHMPREF1078_RS19295 and HMPREF1078_RS03540 are separated by 38 nucleotidesHMPREF1078_RS03540 and HMPREF1078_RS18385 overlap by 64 nucleotidesHMPREF1078_RS18385 and HMPREF1078_RS03550 are separated by 126 nucleotidesHMPREF1078_RS03550 and HMPREF1078_RS18390 are separated by 221 nucleotidesHMPREF1078_RS18390 and HMPREF1078_RS03560 are separated by 436 nucleotidesHMPREF1078_RS03560 and HMPREF1078_RS03565 are separated by 135 nucleotidesHMPREF1078_RS03565 and HMPREF1078_RS20060 are separated by 195 nucleotidesHMPREF1078_RS20060 and HMPREF1078_RS03570 are separated by 495 nucleotides HMPREF1078_RS03525: HMPREF1078_RS03525 - antibiotic biosynthesis monooxygenase, at 830,096 to 830,590 _RS03525 HMPREF1078_RS19500: HMPREF1078_RS19500 - hypothetical protein, at 830,598 to 831,154 _RS19500 HMPREF1078_RS19295: HMPREF1078_RS19295 - hypothetical protein, at 831,117 to 831,266 _RS19295 HMPREF1078_RS03540: HMPREF1078_RS03540 - DUF3737 family protein, at 831,305 to 832,204 _RS03540 HMPREF1078_RS18385: HMPREF1078_RS18385 - MATE family efflux transporter, at 832,141 to 832,388 _RS18385 HMPREF1078_RS03550: HMPREF1078_RS03550 - MalY/PatB family protein, at 832,515 to 833,681 _RS03550 HMPREF1078_RS18390: HMPREF1078_RS18390 - DUF4248 domain-containing protein, at 833,903 to 834,126 _RS18390 HMPREF1078_RS03560: HMPREF1078_RS03560 - 3'-5' exonuclease, at 834,563 to 836,875 _RS03560 HMPREF1078_RS03565: HMPREF1078_RS03565 - glycoside hydrolase family 127 protein, at 837,011 to 838,888 _RS03565 HMPREF1078_RS20060: HMPREF1078_RS20060 - hypothetical protein, at 839,084 to 839,218 _RS20060 HMPREF1078_RS03570: HMPREF1078_RS03570 - RNA polymerase sigma-70 factor, at 839,714 to 840,304 _RS03570
Locus Name Description Strand Phenotype
HMPREF1078_RS03525 HMPREF1078_RS03525 antibiotic biosynthesis monooxygenase + insig.
HMPREF1078_RS19500 HMPREF1078_RS19500 hypothetical protein + sig.
HMPREF1078_RS19295 HMPREF1078_RS19295 hypothetical protein + no data
HMPREF1078_RS03540 HMPREF1078_RS03540 DUF3737 family protein + insig.
HMPREF1078_RS18385 HMPREF1078_RS18385 MATE family efflux transporter + insig.
HMPREF1078_RS03550 HMPREF1078_RS03550 MalY/PatB family protein + insig.
HMPREF1078_RS18390 HMPREF1078_RS18390 DUF4248 domain-containing protein + no data
HMPREF1078_RS03560 HMPREF1078_RS03560 3'-5' exonuclease - strong
HMPREF1078_RS03565 HMPREF1078_RS03565 glycoside hydrolase family 127 protein - insig.
HMPREF1078_RS20060 HMPREF1078_RS20060 hypothetical protein + insig.
HMPREF1078_RS03570 HMPREF1078_RS03570 RNA polymerase sigma-70 factor + insig.

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