Gene info for HMPREF1078_RS03090 in Parabacteroides merdae CL09T00C40

Annotation: helix-turn-helix transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 738,644 to 739,102
See nucleotide sequence around HMPREF1078_RS03090 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03065 and HMPREF1078_RS03070 are separated by 8 nucleotidesHMPREF1078_RS03070 and HMPREF1078_RS03075 overlap by 4 nucleotidesHMPREF1078_RS03075 and HMPREF1078_RS03080 are separated by 58 nucleotidesHMPREF1078_RS03080 and HMPREF1078_RS03085 are separated by 93 nucleotidesHMPREF1078_RS03085 and HMPREF1078_RS03090 are separated by 506 nucleotidesHMPREF1078_RS03090 and HMPREF1078_RS19720 are separated by 144 nucleotidesHMPREF1078_RS19720 and HMPREF1078_RS03095 are separated by 18 nucleotidesHMPREF1078_RS03095 and HMPREF1078_RS03100 are separated by 205 nucleotidesHMPREF1078_RS03100 and HMPREF1078_RS03105 overlap by 4 nucleotidesHMPREF1078_RS03105 and HMPREF1078_RS03110 are separated by 156 nucleotides HMPREF1078_RS03065: HMPREF1078_RS03065 - hypothetical protein, at 732,730 to 733,029 _RS03065 HMPREF1078_RS03070: HMPREF1078_RS03070 - hypothetical protein, at 733,038 to 733,460 _RS03070 HMPREF1078_RS03075: HMPREF1078_RS03075 - hypothetical protein, at 733,457 to 733,930 _RS03075 HMPREF1078_RS03080: HMPREF1078_RS03080 - hypothetical protein, at 733,989 to 736,562 _RS03080 HMPREF1078_RS03085: HMPREF1078_RS03085 - phage integrase SAM-like domain-containing protein, at 736,656 to 738,137 _RS03085 HMPREF1078_RS03090: HMPREF1078_RS03090 - helix-turn-helix transcriptional regulator, at 738,644 to 739,102 _RS03090 HMPREF1078_RS19720: HMPREF1078_RS19720 - hypothetical protein, at 739,247 to 739,438 _RS19720 HMPREF1078_RS03095: HMPREF1078_RS03095 - hypothetical protein, at 739,457 to 739,771 _RS03095 HMPREF1078_RS03100: HMPREF1078_RS03100 - hypothetical protein, at 739,977 to 740,180 _RS03100 HMPREF1078_RS03105: HMPREF1078_RS03105 - CHC2 zinc finger domain-containing protein, at 740,177 to 743,455 _RS03105 HMPREF1078_RS03110: HMPREF1078_RS03110 - ATP-binding protein, at 743,612 to 744,700 _RS03110
Locus Name Description Strand Phenotype
HMPREF1078_RS03065 HMPREF1078_RS03065 hypothetical protein + insig.
HMPREF1078_RS03070 HMPREF1078_RS03070 hypothetical protein + sig.
HMPREF1078_RS03075 HMPREF1078_RS03075 hypothetical protein + insig.
HMPREF1078_RS03080 HMPREF1078_RS03080 hypothetical protein - insig.
HMPREF1078_RS03085 HMPREF1078_RS03085 phage integrase SAM-like domain-containing protein - insig.
HMPREF1078_RS03090 HMPREF1078_RS03090 helix-turn-helix transcriptional regulator - strong
HMPREF1078_RS19720 HMPREF1078_RS19720 hypothetical protein + insig.
HMPREF1078_RS03095 HMPREF1078_RS03095 hypothetical protein + no data
HMPREF1078_RS03100 HMPREF1078_RS03100 hypothetical protein + insig.
HMPREF1078_RS03105 HMPREF1078_RS03105 CHC2 zinc finger domain-containing protein + insig.
HMPREF1078_RS03110 HMPREF1078_RS03110 ATP-binding protein + strong

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