Gene info for HMPREF1078_RS02405 in Parabacteroides merdae CL09T00C40

Annotation: ABC transporter substrate-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 590,738 to 591,652
See nucleotide sequence around HMPREF1078_RS02405 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS02380 and HMPREF1078_RS02385 are separated by 215 nucleotidesHMPREF1078_RS02385 and HMPREF1078_RS02390 are separated by 184 nucleotidesHMPREF1078_RS02390 and HMPREF1078_RS02395 are separated by 41 nucleotidesHMPREF1078_RS02395 and HMPREF1078_RS02400 are separated by 369 nucleotidesHMPREF1078_RS02400 and HMPREF1078_RS02405 are separated by 112 nucleotidesHMPREF1078_RS02405 and HMPREF1078_RS02410 are separated by 7 nucleotidesHMPREF1078_RS02410 and HMPREF1078_RS18325 overlap by 4 nucleotidesHMPREF1078_RS18325 and HMPREF1078_RS02415 are separated by 126 nucleotidesHMPREF1078_RS02415 and HMPREF1078_RS02420 are separated by 5 nucleotidesHMPREF1078_RS02420 and HMPREF1078_RS02425 are separated by 391 nucleotides HMPREF1078_RS02380: HMPREF1078_RS02380 - tRNA-Pro, at 582,686 to 582,760 _RS02380 HMPREF1078_RS02385: HMPREF1078_RS02385 - recombinase family protein, at 582,976 to 583,605 _RS02385 HMPREF1078_RS02390: HMPREF1078_RS02390 - tetratricopeptide repeat protein, at 583,790 to 585,016 _RS02390 HMPREF1078_RS02395: HMPREF1078_RS02395 - DNA gyrase subunit A, at 585,058 to 587,667 _RS02395 HMPREF1078_RS02400: HMPREF1078_RS02400 - ATP-dependent Clp protease ATP-binding subunit, at 588,037 to 590,625 _RS02400 HMPREF1078_RS02405: HMPREF1078_RS02405 - ABC transporter substrate-binding protein, at 590,738 to 591,652 _RS02405 HMPREF1078_RS02410: HMPREF1078_RS02410 - ATP-binding cassette domain-containing protein, at 591,660 to 593,042 _RS02410 HMPREF1078_RS18325: HMPREF1078_RS18325 - HAMP domain-containing sensor histidine kinase, at 593,039 to 593,209 _RS18325 HMPREF1078_RS02415: HMPREF1078_RS02415 - Tex family protein, at 593,336 to 595,477 _RS02415 HMPREF1078_RS02420: HMPREF1078_RS02420 - Cys-tRNA(Pro) deacylase, at 595,483 to 595,965 _RS02420 HMPREF1078_RS02425: HMPREF1078_RS02425 - DUF6261 family protein, at 596,357 to 597,190 _RS02425
Locus Name Description Strand Phenotype
HMPREF1078_RS02380 HMPREF1078_RS02380 tRNA-Pro - no data
HMPREF1078_RS02385 HMPREF1078_RS02385 recombinase family protein + strong
HMPREF1078_RS02390 HMPREF1078_RS02390 tetratricopeptide repeat protein - strong
HMPREF1078_RS02395 HMPREF1078_RS02395 DNA gyrase subunit A - no data
HMPREF1078_RS02400 HMPREF1078_RS02400 ATP-dependent Clp protease ATP-binding subunit + strong
HMPREF1078_RS02405 HMPREF1078_RS02405 ABC transporter substrate-binding protein + insig.
HMPREF1078_RS02410 HMPREF1078_RS02410 ATP-binding cassette domain-containing protein + insig.
HMPREF1078_RS18325 HMPREF1078_RS18325 HAMP domain-containing sensor histidine kinase - insig.
HMPREF1078_RS02415 HMPREF1078_RS02415 Tex family protein + insig.
HMPREF1078_RS02420 HMPREF1078_RS02420 Cys-tRNA(Pro) deacylase + insig.
HMPREF1078_RS02425 HMPREF1078_RS02425 DUF6261 family protein + insig.

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