Gene info for HMPREF1078_RS02110 in Parabacteroides merdae CL09T00C40

Annotation: transcription-repair coupling factor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 522,635 to 525,994
See nucleotide sequence around HMPREF1078_RS02110 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS02090 and HMPREF1078_RS02095 are separated by 763 nucleotidesHMPREF1078_RS02095 and HMPREF1078_RS18315 are separated by 34 nucleotidesHMPREF1078_RS18315 and HMPREF1078_RS02100 are separated by 12 nucleotidesHMPREF1078_RS02100 and HMPREF1078_RS02105 are separated by 82 nucleotidesHMPREF1078_RS02105 and HMPREF1078_RS02110 are separated by 5 nucleotidesHMPREF1078_RS02110 and HMPREF1078_RS02115 are separated by 172 nucleotidesHMPREF1078_RS02115 and HMPREF1078_RS19700 are separated by 207 nucleotidesHMPREF1078_RS19700 and HMPREF1078_RS02130 are separated by 6 nucleotidesHMPREF1078_RS02130 and HMPREF1078_RS02135 are separated by 200 nucleotidesHMPREF1078_RS02135 and HMPREF1078_RS02140 are separated by 145 nucleotides HMPREF1078_RS02090: HMPREF1078_RS02090 - HAMP domain-containing sensor histidine kinase, at 514,296 to 515,732 _RS02090 HMPREF1078_RS02095: HMPREF1078_RS02095 - TonB-dependent receptor, at 516,496 to 518,871 _RS02095 HMPREF1078_RS18315: HMPREF1078_RS18315 - helix-turn-helix domain-containing protein, at 518,906 to 519,103 _RS18315 HMPREF1078_RS02100: HMPREF1078_RS02100 - replicative DNA helicase, at 519,116 to 520,639 _RS02100 HMPREF1078_RS02105: HMPREF1078_RS02105 - AMP-binding protein, at 520,722 to 522,629 _RS02105 HMPREF1078_RS02110: HMPREF1078_RS02110 - transcription-repair coupling factor, at 522,635 to 525,994 _RS02110 HMPREF1078_RS02115: HMPREF1078_RS02115 - polyprenol monophosphomannose synthase, at 526,167 to 526,925 _RS02115 HMPREF1078_RS19700: HMPREF1078_RS19700 - DDE transposase, at 527,133 to 527,996 _RS19700 HMPREF1078_RS02130: HMPREF1078_RS02130 - hybrid sensor histidine kinase/response regulator, at 528,003 to 529,121 _RS02130 HMPREF1078_RS02135: HMPREF1078_RS02135 - alpha-L-arabinofuranosidase C-terminal domain-containing protein, at 529,322 to 531,772 _RS02135 HMPREF1078_RS02140: HMPREF1078_RS02140 - family 20 glycosylhydrolase, at 531,918 to 534,266 _RS02140
Locus Name Description Strand Phenotype
HMPREF1078_RS02090 HMPREF1078_RS02090 HAMP domain-containing sensor histidine kinase - insig.
HMPREF1078_RS02095 HMPREF1078_RS02095 TonB-dependent receptor + cofit
HMPREF1078_RS18315 HMPREF1078_RS18315 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS02100 HMPREF1078_RS02100 replicative DNA helicase + no data
HMPREF1078_RS02105 HMPREF1078_RS02105 AMP-binding protein - insig.
HMPREF1078_RS02110 HMPREF1078_RS02110 transcription-repair coupling factor - cofit
HMPREF1078_RS02115 HMPREF1078_RS02115 polyprenol monophosphomannose synthase + no data
HMPREF1078_RS19700 HMPREF1078_RS19700 DDE transposase - insig.
HMPREF1078_RS02130 HMPREF1078_RS02130 hybrid sensor histidine kinase/response regulator - strong
HMPREF1078_RS02135 HMPREF1078_RS02135 alpha-L-arabinofuranosidase C-terminal domain-containing protein + cofit
HMPREF1078_RS02140 HMPREF1078_RS02140 family 20 glycosylhydrolase - sig.

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