Gene info for HMPREF1078_RS01940 in Parabacteroides merdae CL09T00C40

Annotation: 2-oxo acid dehydrogenase subunit E2
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 481,742 to 483,103
See nucleotide sequence around HMPREF1078_RS01940 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01915 and HMPREF1078_RS01920 are separated by 11 nucleotidesHMPREF1078_RS01920 and HMPREF1078_RS01925 are separated by 5 nucleotidesHMPREF1078_RS01925 and HMPREF1078_RS01930 are separated by 170 nucleotidesHMPREF1078_RS01930 and HMPREF1078_RS01935 are separated by 161 nucleotidesHMPREF1078_RS01935 and HMPREF1078_RS01940 are separated by 542 nucleotidesHMPREF1078_RS01940 and HMPREF1078_RS01945 are separated by 16 nucleotidesHMPREF1078_RS01945 and HMPREF1078_RS01950 are separated by 2 nucleotidesHMPREF1078_RS01950 and HMPREF1078_RS01955 are separated by 12 nucleotidesHMPREF1078_RS01955 and HMPREF1078_RS01960 are separated by 168 nucleotidesHMPREF1078_RS01960 and HMPREF1078_RS01965 are separated by 170 nucleotides HMPREF1078_RS01915: HMPREF1078_RS01915 - efflux RND transporter periplasmic adaptor subunit, at 472,924 to 473,973 _RS01915 HMPREF1078_RS01920: HMPREF1078_RS01920 - efflux RND transporter permease subunit, at 473,985 to 477,026 _RS01920 HMPREF1078_RS01925: HMPREF1078_RS01925 - TolC family protein, at 477,032 to 478,324 _RS01925 HMPREF1078_RS01930: HMPREF1078_RS01930 - flavodoxin, at 478,495 to 479,001 _RS01930 HMPREF1078_RS01935: HMPREF1078_RS01935 - alpha-ketoacid dehydrogenase subunit alpha/beta, at 479,163 to 481,199 _RS01935 HMPREF1078_RS01940: HMPREF1078_RS01940 - 2-oxo acid dehydrogenase subunit E2, at 481,742 to 483,103 _RS01940 HMPREF1078_RS01945: HMPREF1078_RS01945 - lipoate--protein ligase family protein, at 483,120 to 483,860 _RS01945 HMPREF1078_RS01950: HMPREF1078_RS01950 - dihydrolipoyl dehydrogenase, at 483,863 to 485,212 _RS01950 HMPREF1078_RS01955: HMPREF1078_RS01955 - nitroreductase family protein, at 485,225 to 485,827 _RS01955 HMPREF1078_RS01960: HMPREF1078_RS01960 - hypothetical protein, at 485,996 to 487,258 _RS01960 HMPREF1078_RS01965: HMPREF1078_RS01965 - 50S ribosomal protein L28, at 487,429 to 487,668 _RS01965
Locus Name Description Strand Phenotype
HMPREF1078_RS01915 HMPREF1078_RS01915 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS01920 HMPREF1078_RS01920 efflux RND transporter permease subunit + insig.
HMPREF1078_RS01925 HMPREF1078_RS01925 TolC family protein + insig.
HMPREF1078_RS01930 HMPREF1078_RS01930 flavodoxin - insig.
HMPREF1078_RS01935 HMPREF1078_RS01935 alpha-ketoacid dehydrogenase subunit alpha/beta - insig.
HMPREF1078_RS01940 HMPREF1078_RS01940 2-oxo acid dehydrogenase subunit E2 - cofit
HMPREF1078_RS01945 HMPREF1078_RS01945 lipoate--protein ligase family protein - insig.
HMPREF1078_RS01950 HMPREF1078_RS01950 dihydrolipoyl dehydrogenase - insig.
HMPREF1078_RS01955 HMPREF1078_RS01955 nitroreductase family protein - insig.
HMPREF1078_RS01960 HMPREF1078_RS01960 hypothetical protein + insig.
HMPREF1078_RS01965 HMPREF1078_RS01965 50S ribosomal protein L28 + no data

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