Gene info for HMPREF1078_RS01925 in Parabacteroides merdae CL09T00C40

Annotation: TolC family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 477,032 to 478,324
See nucleotide sequence around HMPREF1078_RS01925 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01900 and HMPREF1078_RS01905 are separated by 4 nucleotidesHMPREF1078_RS01905 and HMPREF1078_RS01910 are separated by 172 nucleotidesHMPREF1078_RS01910 and HMPREF1078_RS01915 are separated by 148 nucleotidesHMPREF1078_RS01915 and HMPREF1078_RS01920 are separated by 11 nucleotidesHMPREF1078_RS01920 and HMPREF1078_RS01925 are separated by 5 nucleotidesHMPREF1078_RS01925 and HMPREF1078_RS01930 are separated by 170 nucleotidesHMPREF1078_RS01930 and HMPREF1078_RS01935 are separated by 161 nucleotidesHMPREF1078_RS01935 and HMPREF1078_RS01940 are separated by 542 nucleotidesHMPREF1078_RS01940 and HMPREF1078_RS01945 are separated by 16 nucleotidesHMPREF1078_RS01945 and HMPREF1078_RS01950 are separated by 2 nucleotides HMPREF1078_RS01900: HMPREF1078_RS01900 - hypothetical protein, at 470,746 to 470,952 _RS01900 HMPREF1078_RS01905: HMPREF1078_RS01905 - hemolysin III family protein, at 470,957 to 471,610 _RS01905 HMPREF1078_RS01910: HMPREF1078_RS01910 - DNA/RNA non-specific endonuclease, at 471,783 to 472,775 _RS01910 HMPREF1078_RS01915: HMPREF1078_RS01915 - efflux RND transporter periplasmic adaptor subunit, at 472,924 to 473,973 _RS01915 HMPREF1078_RS01920: HMPREF1078_RS01920 - efflux RND transporter permease subunit, at 473,985 to 477,026 _RS01920 HMPREF1078_RS01925: HMPREF1078_RS01925 - TolC family protein, at 477,032 to 478,324 _RS01925 HMPREF1078_RS01930: HMPREF1078_RS01930 - flavodoxin, at 478,495 to 479,001 _RS01930 HMPREF1078_RS01935: HMPREF1078_RS01935 - alpha-ketoacid dehydrogenase subunit alpha/beta, at 479,163 to 481,199 _RS01935 HMPREF1078_RS01940: HMPREF1078_RS01940 - 2-oxo acid dehydrogenase subunit E2, at 481,742 to 483,103 _RS01940 HMPREF1078_RS01945: HMPREF1078_RS01945 - lipoate--protein ligase family protein, at 483,120 to 483,860 _RS01945 HMPREF1078_RS01950: HMPREF1078_RS01950 - dihydrolipoyl dehydrogenase, at 483,863 to 485,212 _RS01950
Locus Name Description Strand Phenotype
HMPREF1078_RS01900 HMPREF1078_RS01900 hypothetical protein + no data
HMPREF1078_RS01905 HMPREF1078_RS01905 hemolysin III family protein + strong
HMPREF1078_RS01910 HMPREF1078_RS01910 DNA/RNA non-specific endonuclease + insig.
HMPREF1078_RS01915 HMPREF1078_RS01915 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS01920 HMPREF1078_RS01920 efflux RND transporter permease subunit + insig.
HMPREF1078_RS01925 HMPREF1078_RS01925 TolC family protein + insig.
HMPREF1078_RS01930 HMPREF1078_RS01930 flavodoxin - insig.
HMPREF1078_RS01935 HMPREF1078_RS01935 alpha-ketoacid dehydrogenase subunit alpha/beta - insig.
HMPREF1078_RS01940 HMPREF1078_RS01940 2-oxo acid dehydrogenase subunit E2 - cofit
HMPREF1078_RS01945 HMPREF1078_RS01945 lipoate--protein ligase family protein - insig.
HMPREF1078_RS01950 HMPREF1078_RS01950 dihydrolipoyl dehydrogenase - insig.

Or browse nearby genes

Or see the comparative fitness browser