Gene info for HMPREF1078_RS01780 in Parabacteroides merdae CL09T00C40

Annotation: family 78 glycoside hydrolase catalytic domain
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 444,438 to 447,017
See nucleotide sequence around HMPREF1078_RS01780 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01755 and HMPREF1078_RS01760 are separated by 4 nucleotidesHMPREF1078_RS01760 and HMPREF1078_RS01765 are separated by 44 nucleotidesHMPREF1078_RS01765 and HMPREF1078_RS01770 are separated by 164 nucleotidesHMPREF1078_RS01770 and HMPREF1078_RS01775 are separated by 107 nucleotidesHMPREF1078_RS01775 and HMPREF1078_RS01780 are separated by 17 nucleotidesHMPREF1078_RS01780 and HMPREF1078_RS01785 are separated by 11 nucleotidesHMPREF1078_RS01785 and HMPREF1078_RS19690 are separated by 175 nucleotidesHMPREF1078_RS19690 and HMPREF1078_RS19695 overlap by 43 nucleotidesHMPREF1078_RS19695 and HMPREF1078_RS01800 are separated by 20 nucleotidesHMPREF1078_RS01800 and HMPREF1078_RS01805 are separated by 289 nucleotides HMPREF1078_RS01755: HMPREF1078_RS01755 - rhamnulokinase family protein, at 437,787 to 439,265 _RS01755 HMPREF1078_RS01760: HMPREF1078_RS01760 - L-rhamnose isomerase, at 439,270 to 440,526 _RS01760 HMPREF1078_RS01765: HMPREF1078_RS01765 - L-rhamnose/proton symporter RhaT, at 440,571 to 441,596 _RS01765 HMPREF1078_RS01770: HMPREF1078_RS01770 - rhamnulose-1-phosphate aldolase, at 441,761 to 442,561 _RS01770 HMPREF1078_RS01775: HMPREF1078_RS01775 - alpha-L-rhamnosidase C-terminal domain-containing protein, at 442,669 to 444,420 _RS01775 HMPREF1078_RS01780: HMPREF1078_RS01780 - family 78 glycoside hydrolase catalytic domain, at 444,438 to 447,017 _RS01780 HMPREF1078_RS01785: HMPREF1078_RS01785 - alpha-L-rhamnosidase C-terminal domain-containing protein, at 447,029 to 449,245 _RS01785 HMPREF1078_RS19690: HMPREF1078_RS19690 - energy transducer TonB, at 449,421 to 449,954 _RS19690 HMPREF1078_RS19695: HMPREF1078_RS19695 - hypothetical protein, at 449,912 to 450,565 _RS19695 HMPREF1078_RS01800: HMPREF1078_RS01800 - BlaI/MecI/CopY family transcriptional regulator, at 450,586 to 450,945 _RS01800 HMPREF1078_RS01805: HMPREF1078_RS01805 - carboxynorspermidine decarboxylase, at 451,235 to 452,374 _RS01805
Locus Name Description Strand Phenotype
HMPREF1078_RS01755 HMPREF1078_RS01755 rhamnulokinase family protein + insig.
HMPREF1078_RS01760 HMPREF1078_RS01760 L-rhamnose isomerase + insig.
HMPREF1078_RS01765 HMPREF1078_RS01765 L-rhamnose/proton symporter RhaT + insig.
HMPREF1078_RS01770 HMPREF1078_RS01770 rhamnulose-1-phosphate aldolase + insig.
HMPREF1078_RS01775 HMPREF1078_RS01775 alpha-L-rhamnosidase C-terminal domain-containing protein + insig.
HMPREF1078_RS01780 HMPREF1078_RS01780 family 78 glycoside hydrolase catalytic domain + insig.
HMPREF1078_RS01785 HMPREF1078_RS01785 alpha-L-rhamnosidase C-terminal domain-containing protein + insig.
HMPREF1078_RS19690 HMPREF1078_RS19690 energy transducer TonB - insig.
HMPREF1078_RS19695 HMPREF1078_RS19695 hypothetical protein - insig.
HMPREF1078_RS01800 HMPREF1078_RS01800 BlaI/MecI/CopY family transcriptional regulator - insig.
HMPREF1078_RS01805 HMPREF1078_RS01805 carboxynorspermidine decarboxylase + strong

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