Gene info for HMPREF1078_RS01255 in Parabacteroides merdae CL09T00C40

Annotation: PL29 family lyase N-terminal domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 316,401 to 318,356
See nucleotide sequence around HMPREF1078_RS01255 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01230 and HMPREF1078_RS01235 are separated by 442 nucleotidesHMPREF1078_RS01235 and HMPREF1078_RS01240 are separated by 183 nucleotidesHMPREF1078_RS01240 and HMPREF1078_RS01245 are separated by 71 nucleotidesHMPREF1078_RS01245 and HMPREF1078_RS01250 are separated by 293 nucleotidesHMPREF1078_RS01250 and HMPREF1078_RS01255 are separated by 128 nucleotidesHMPREF1078_RS01255 and HMPREF1078_RS01260 are separated by 103 nucleotidesHMPREF1078_RS01260 and HMPREF1078_RS01265 are separated by 26 nucleotidesHMPREF1078_RS01265 and HMPREF1078_RS01270 are separated by 141 nucleotidesHMPREF1078_RS01270 and HMPREF1078_RS01275 are separated by 337 nucleotidesHMPREF1078_RS01275 and HMPREF1078_RS01280 are separated by 266 nucleotides HMPREF1078_RS01230: HMPREF1078_RS01230 - diaminopimelate epimerase, at 308,114 to 308,938 _RS01230 HMPREF1078_RS01235: HMPREF1078_RS01235 - family 78 glycoside hydrolase catalytic domain, at 309,381 to 311,021 _RS01235 HMPREF1078_RS01240: HMPREF1078_RS01240 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 311,205 to 314,789 _RS01240 HMPREF1078_RS01245: HMPREF1078_RS01245 - cupin domain-containing protein, at 314,861 to 315,199 _RS01245 HMPREF1078_RS01250: HMPREF1078_RS01250 - DUF4469 domain-containing protein, at 315,493 to 316,272 _RS01250 HMPREF1078_RS01255: HMPREF1078_RS01255 - PL29 family lyase N-terminal domain-containing protein, at 316,401 to 318,356 _RS01255 HMPREF1078_RS01260: HMPREF1078_RS01260 - asparagine synthase B, at 318,460 to 320,124 _RS01260 HMPREF1078_RS01265: HMPREF1078_RS01265 - glutamate synthase subunit beta, at 320,151 to 321,584 _RS01265 HMPREF1078_RS01270: HMPREF1078_RS01270 - glutamate synthase large subunit, at 321,726 to 326,249 _RS01270 HMPREF1078_RS01275: HMPREF1078_RS01275 - HAMP domain-containing sensor histidine kinase, at 326,587 to 328,131 _RS01275 HMPREF1078_RS01280: HMPREF1078_RS01280 - RecQ family ATP-dependent DNA helicase, at 328,398 to 333,257 _RS01280
Locus Name Description Strand Phenotype
HMPREF1078_RS01230 HMPREF1078_RS01230 diaminopimelate epimerase - insig.
HMPREF1078_RS01235 HMPREF1078_RS01235 family 78 glycoside hydrolase catalytic domain - insig.
HMPREF1078_RS01240 HMPREF1078_RS01240 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS01245 HMPREF1078_RS01245 cupin domain-containing protein + insig.
HMPREF1078_RS01250 HMPREF1078_RS01250 DUF4469 domain-containing protein + insig.
HMPREF1078_RS01255 HMPREF1078_RS01255 PL29 family lyase N-terminal domain-containing protein + insig.
HMPREF1078_RS01260 HMPREF1078_RS01260 asparagine synthase B - insig.
HMPREF1078_RS01265 HMPREF1078_RS01265 glutamate synthase subunit beta - insig.
HMPREF1078_RS01270 HMPREF1078_RS01270 glutamate synthase large subunit - insig.
HMPREF1078_RS01275 HMPREF1078_RS01275 HAMP domain-containing sensor histidine kinase - insig.
HMPREF1078_RS01280 HMPREF1078_RS01280 RecQ family ATP-dependent DNA helicase + cofit

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