Gene info for HMPREF1078_RS01225 in Parabacteroides merdae CL09T00C40

Annotation: LL-diaminopimelate aminotransferase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 306,858 to 308,087
See nucleotide sequence around HMPREF1078_RS01225 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01200 and HMPREF1078_RS01205 are separated by 73 nucleotidesHMPREF1078_RS01205 and HMPREF1078_RS01210 are separated by 676 nucleotidesHMPREF1078_RS01210 and HMPREF1078_RS01215 are separated by 122 nucleotidesHMPREF1078_RS01215 and HMPREF1078_RS01220 are separated by 132 nucleotidesHMPREF1078_RS01220 and HMPREF1078_RS01225 are separated by 67 nucleotidesHMPREF1078_RS01225 and HMPREF1078_RS01230 are separated by 26 nucleotidesHMPREF1078_RS01230 and HMPREF1078_RS01235 are separated by 442 nucleotidesHMPREF1078_RS01235 and HMPREF1078_RS01240 are separated by 183 nucleotidesHMPREF1078_RS01240 and HMPREF1078_RS01245 are separated by 71 nucleotidesHMPREF1078_RS01245 and HMPREF1078_RS01250 are separated by 293 nucleotides HMPREF1078_RS01200: HMPREF1078_RS01200 - DEAD/DEAH box helicase, at 298,735 to 299,994 _RS01200 HMPREF1078_RS01205: HMPREF1078_RS01205 - Gfo/Idh/MocA family oxidoreductase, at 300,068 to 301,477 _RS01205 HMPREF1078_RS01210: HMPREF1078_RS01210 - NAD(+) synthase, at 302,154 to 304,085 _RS01210 HMPREF1078_RS01215: HMPREF1078_RS01215 - hypothetical protein, at 304,208 to 304,471 _RS01215 HMPREF1078_RS01220: HMPREF1078_RS01220 - glutamine synthetase III, at 304,604 to 306,790 _RS01220 HMPREF1078_RS01225: HMPREF1078_RS01225 - LL-diaminopimelate aminotransferase, at 306,858 to 308,087 _RS01225 HMPREF1078_RS01230: HMPREF1078_RS01230 - diaminopimelate epimerase, at 308,114 to 308,938 _RS01230 HMPREF1078_RS01235: HMPREF1078_RS01235 - family 78 glycoside hydrolase catalytic domain, at 309,381 to 311,021 _RS01235 HMPREF1078_RS01240: HMPREF1078_RS01240 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 311,205 to 314,789 _RS01240 HMPREF1078_RS01245: HMPREF1078_RS01245 - cupin domain-containing protein, at 314,861 to 315,199 _RS01245 HMPREF1078_RS01250: HMPREF1078_RS01250 - DUF4469 domain-containing protein, at 315,493 to 316,272 _RS01250
Locus Name Description Strand Phenotype
HMPREF1078_RS01200 HMPREF1078_RS01200 DEAD/DEAH box helicase + insig.
HMPREF1078_RS01205 HMPREF1078_RS01205 Gfo/Idh/MocA family oxidoreductase + strong
HMPREF1078_RS01210 HMPREF1078_RS01210 NAD(+) synthase - no data
HMPREF1078_RS01215 HMPREF1078_RS01215 hypothetical protein - sig.
HMPREF1078_RS01220 HMPREF1078_RS01220 glutamine synthetase III - insig.
HMPREF1078_RS01225 HMPREF1078_RS01225 LL-diaminopimelate aminotransferase - insig.
HMPREF1078_RS01230 HMPREF1078_RS01230 diaminopimelate epimerase - insig.
HMPREF1078_RS01235 HMPREF1078_RS01235 family 78 glycoside hydrolase catalytic domain - insig.
HMPREF1078_RS01240 HMPREF1078_RS01240 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS01245 HMPREF1078_RS01245 cupin domain-containing protein + insig.
HMPREF1078_RS01250 HMPREF1078_RS01250 DUF4469 domain-containing protein + insig.

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