Gene info for HMPREF1078_RS01200 in Parabacteroides merdae CL09T00C40

Annotation: DEAD/DEAH box helicase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 298,735 to 299,994
See nucleotide sequence around HMPREF1078_RS01200 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01175 and HMPREF1078_RS01180 overlap by 17 nucleotidesHMPREF1078_RS01180 and HMPREF1078_RS01185 overlap by 79 nucleotidesHMPREF1078_RS01185 and HMPREF1078_RS01190 are separated by 33 nucleotidesHMPREF1078_RS01190 and HMPREF1078_RS01195 are separated by 57 nucleotidesHMPREF1078_RS01195 and HMPREF1078_RS01200 are separated by 134 nucleotidesHMPREF1078_RS01200 and HMPREF1078_RS01205 are separated by 73 nucleotidesHMPREF1078_RS01205 and HMPREF1078_RS01210 are separated by 676 nucleotidesHMPREF1078_RS01210 and HMPREF1078_RS01215 are separated by 122 nucleotidesHMPREF1078_RS01215 and HMPREF1078_RS01220 are separated by 132 nucleotidesHMPREF1078_RS01220 and HMPREF1078_RS01225 are separated by 67 nucleotides HMPREF1078_RS01175: HMPREF1078_RS01175 - aminodeoxychorismate synthase component I, at 293,420 to 294,421 _RS01175 HMPREF1078_RS01180: HMPREF1078_RS01180 - aminotransferase class IV, at 294,405 to 294,995 _RS01180 HMPREF1078_RS01185: HMPREF1078_RS01185 - murein L,D-transpeptidase catalytic domain family protein, at 294,917 to 295,663 _RS01185 HMPREF1078_RS01190: HMPREF1078_RS01190 - L,D-transpeptidase, at 295,697 to 296,713 _RS01190 HMPREF1078_RS01195: HMPREF1078_RS01195 - DNA helicase RecQ, at 296,771 to 298,600 _RS01195 HMPREF1078_RS01200: HMPREF1078_RS01200 - DEAD/DEAH box helicase, at 298,735 to 299,994 _RS01200 HMPREF1078_RS01205: HMPREF1078_RS01205 - Gfo/Idh/MocA family oxidoreductase, at 300,068 to 301,477 _RS01205 HMPREF1078_RS01210: HMPREF1078_RS01210 - NAD(+) synthase, at 302,154 to 304,085 _RS01210 HMPREF1078_RS01215: HMPREF1078_RS01215 - hypothetical protein, at 304,208 to 304,471 _RS01215 HMPREF1078_RS01220: HMPREF1078_RS01220 - glutamine synthetase III, at 304,604 to 306,790 _RS01220 HMPREF1078_RS01225: HMPREF1078_RS01225 - LL-diaminopimelate aminotransferase, at 306,858 to 308,087 _RS01225
Locus Name Description Strand Phenotype
HMPREF1078_RS01175 HMPREF1078_RS01175 aminodeoxychorismate synthase component I + insig.
HMPREF1078_RS01180 HMPREF1078_RS01180 aminotransferase class IV + insig.
HMPREF1078_RS01185 HMPREF1078_RS01185 murein L,D-transpeptidase catalytic domain family protein - cofit
HMPREF1078_RS01190 HMPREF1078_RS01190 L,D-transpeptidase - insig.
HMPREF1078_RS01195 HMPREF1078_RS01195 DNA helicase RecQ - insig.
HMPREF1078_RS01200 HMPREF1078_RS01200 DEAD/DEAH box helicase + insig.
HMPREF1078_RS01205 HMPREF1078_RS01205 Gfo/Idh/MocA family oxidoreductase + insig.
HMPREF1078_RS01210 HMPREF1078_RS01210 NAD(+) synthase - no data
HMPREF1078_RS01215 HMPREF1078_RS01215 hypothetical protein - insig.
HMPREF1078_RS01220 HMPREF1078_RS01220 glutamine synthetase III - insig.
HMPREF1078_RS01225 HMPREF1078_RS01225 LL-diaminopimelate aminotransferase - insig.

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