Gene info for HMPREF1078_RS01190 in Parabacteroides merdae CL09T00C40

Annotation: L,D-transpeptidase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 295,697 to 296,713
See nucleotide sequence around HMPREF1078_RS01190 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01165 and HMPREF1078_RS01170 are separated by 38 nucleotidesHMPREF1078_RS01170 and HMPREF1078_RS01175 overlap by 4 nucleotidesHMPREF1078_RS01175 and HMPREF1078_RS01180 overlap by 17 nucleotidesHMPREF1078_RS01180 and HMPREF1078_RS01185 overlap by 79 nucleotidesHMPREF1078_RS01185 and HMPREF1078_RS01190 are separated by 33 nucleotidesHMPREF1078_RS01190 and HMPREF1078_RS01195 are separated by 57 nucleotidesHMPREF1078_RS01195 and HMPREF1078_RS01200 are separated by 134 nucleotidesHMPREF1078_RS01200 and HMPREF1078_RS01205 are separated by 73 nucleotidesHMPREF1078_RS01205 and HMPREF1078_RS01210 are separated by 676 nucleotidesHMPREF1078_RS01210 and HMPREF1078_RS01215 are separated by 122 nucleotides HMPREF1078_RS01165: HMPREF1078_RS01165 - agmatine deiminase family protein, at 291,472 to 292,509 _RS01165 HMPREF1078_RS01170: HMPREF1078_RS01170 - carbon-nitrogen hydrolase, at 292,548 to 293,423 _RS01170 HMPREF1078_RS01175: HMPREF1078_RS01175 - aminodeoxychorismate synthase component I, at 293,420 to 294,421 _RS01175 HMPREF1078_RS01180: HMPREF1078_RS01180 - aminotransferase class IV, at 294,405 to 294,995 _RS01180 HMPREF1078_RS01185: HMPREF1078_RS01185 - murein L,D-transpeptidase catalytic domain family protein, at 294,917 to 295,663 _RS01185 HMPREF1078_RS01190: HMPREF1078_RS01190 - L,D-transpeptidase, at 295,697 to 296,713 _RS01190 HMPREF1078_RS01195: HMPREF1078_RS01195 - DNA helicase RecQ, at 296,771 to 298,600 _RS01195 HMPREF1078_RS01200: HMPREF1078_RS01200 - DEAD/DEAH box helicase, at 298,735 to 299,994 _RS01200 HMPREF1078_RS01205: HMPREF1078_RS01205 - Gfo/Idh/MocA family oxidoreductase, at 300,068 to 301,477 _RS01205 HMPREF1078_RS01210: HMPREF1078_RS01210 - NAD(+) synthase, at 302,154 to 304,085 _RS01210 HMPREF1078_RS01215: HMPREF1078_RS01215 - hypothetical protein, at 304,208 to 304,471 _RS01215
Locus Name Description Strand Phenotype
HMPREF1078_RS01165 HMPREF1078_RS01165 agmatine deiminase family protein + strong
HMPREF1078_RS01170 HMPREF1078_RS01170 carbon-nitrogen hydrolase + strong
HMPREF1078_RS01175 HMPREF1078_RS01175 aminodeoxychorismate synthase component I + insig.
HMPREF1078_RS01180 HMPREF1078_RS01180 aminotransferase class IV + insig.
HMPREF1078_RS01185 HMPREF1078_RS01185 murein L,D-transpeptidase catalytic domain family protein - insig.
HMPREF1078_RS01190 HMPREF1078_RS01190 L,D-transpeptidase - insig.
HMPREF1078_RS01195 HMPREF1078_RS01195 DNA helicase RecQ - insig.
HMPREF1078_RS01200 HMPREF1078_RS01200 DEAD/DEAH box helicase + insig.
HMPREF1078_RS01205 HMPREF1078_RS01205 Gfo/Idh/MocA family oxidoreductase + strong
HMPREF1078_RS01210 HMPREF1078_RS01210 NAD(+) synthase - no data
HMPREF1078_RS01215 HMPREF1078_RS01215 hypothetical protein - sig.

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