Gene info for HMPREF1078_RS01170 in Parabacteroides merdae CL09T00C40

Annotation: carbon-nitrogen hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 292,548 to 293,423
See nucleotide sequence around HMPREF1078_RS01170 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS19680 and HMPREF1078_RS01155 are separated by 85 nucleotidesHMPREF1078_RS01155 and HMPREF1078_RS18295 overlap by 14 nucleotidesHMPREF1078_RS18295 and HMPREF1078_RS01160 are separated by 65 nucleotidesHMPREF1078_RS01160 and HMPREF1078_RS01165 are separated by 62 nucleotidesHMPREF1078_RS01165 and HMPREF1078_RS01170 are separated by 38 nucleotidesHMPREF1078_RS01170 and HMPREF1078_RS01175 overlap by 4 nucleotidesHMPREF1078_RS01175 and HMPREF1078_RS01180 overlap by 17 nucleotidesHMPREF1078_RS01180 and HMPREF1078_RS01185 overlap by 79 nucleotidesHMPREF1078_RS01185 and HMPREF1078_RS01190 are separated by 33 nucleotidesHMPREF1078_RS01190 and HMPREF1078_RS01195 are separated by 57 nucleotides HMPREF1078_RS19680: HMPREF1078_RS19680 - transposase, at 288,877 to 289,257 _RS19680 HMPREF1078_RS01155: HMPREF1078_RS01155 - hypothetical protein, at 289,343 to 289,594 _RS01155 HMPREF1078_RS18295: HMPREF1078_RS18295 - helix-turn-helix domain-containing protein, at 289,581 to 289,787 _RS18295 HMPREF1078_RS01160: HMPREF1078_RS01160 - DUF6493 family protein, at 289,853 to 291,409 _RS01160 HMPREF1078_RS01165: HMPREF1078_RS01165 - agmatine deiminase family protein, at 291,472 to 292,509 _RS01165 HMPREF1078_RS01170: HMPREF1078_RS01170 - carbon-nitrogen hydrolase, at 292,548 to 293,423 _RS01170 HMPREF1078_RS01175: HMPREF1078_RS01175 - aminodeoxychorismate synthase component I, at 293,420 to 294,421 _RS01175 HMPREF1078_RS01180: HMPREF1078_RS01180 - aminotransferase class IV, at 294,405 to 294,995 _RS01180 HMPREF1078_RS01185: HMPREF1078_RS01185 - murein L,D-transpeptidase catalytic domain family protein, at 294,917 to 295,663 _RS01185 HMPREF1078_RS01190: HMPREF1078_RS01190 - L,D-transpeptidase, at 295,697 to 296,713 _RS01190 HMPREF1078_RS01195: HMPREF1078_RS01195 - DNA helicase RecQ, at 296,771 to 298,600 _RS01195
Locus Name Description Strand Phenotype
HMPREF1078_RS19680 HMPREF1078_RS19680 transposase + no data
HMPREF1078_RS01155 HMPREF1078_RS01155 hypothetical protein - no data
HMPREF1078_RS18295 HMPREF1078_RS18295 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS01160 HMPREF1078_RS01160 DUF6493 family protein + insig.
HMPREF1078_RS01165 HMPREF1078_RS01165 agmatine deiminase family protein + strong
HMPREF1078_RS01170 HMPREF1078_RS01170 carbon-nitrogen hydrolase + strong
HMPREF1078_RS01175 HMPREF1078_RS01175 aminodeoxychorismate synthase component I + insig.
HMPREF1078_RS01180 HMPREF1078_RS01180 aminotransferase class IV + insig.
HMPREF1078_RS01185 HMPREF1078_RS01185 murein L,D-transpeptidase catalytic domain family protein - cofit
HMPREF1078_RS01190 HMPREF1078_RS01190 L,D-transpeptidase - insig.
HMPREF1078_RS01195 HMPREF1078_RS01195 DNA helicase RecQ - insig.

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