Gene info for HMPREF1078_RS01150 in Parabacteroides merdae CL09T00C40

Annotation: IS1182 family transposase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 287,764 to 288,776
See nucleotide sequence around HMPREF1078_RS01150 or for all of scaffold NZ_JH976524

Nearby Genes

500 ntHMPREF1078_RS01125 and HMPREF1078_RS01130 are separated by 87 nucleotidesHMPREF1078_RS01130 and HMPREF1078_RS01135 overlap by 26 nucleotidesHMPREF1078_RS01135 and HMPREF1078_RS01140 are separated by 385 nucleotidesHMPREF1078_RS01140 and HMPREF1078_RS01145 are separated by 353 nucleotidesHMPREF1078_RS01145 and HMPREF1078_RS01150 are separated by 158 nucleotidesHMPREF1078_RS01150 and HMPREF1078_RS19680 are separated by 100 nucleotidesHMPREF1078_RS19680 and HMPREF1078_RS01155 are separated by 85 nucleotidesHMPREF1078_RS01155 and HMPREF1078_RS18295 overlap by 14 nucleotidesHMPREF1078_RS18295 and HMPREF1078_RS01160 are separated by 65 nucleotidesHMPREF1078_RS01160 and HMPREF1078_RS01165 are separated by 62 nucleotides HMPREF1078_RS01125: HMPREF1078_RS01125 - bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II, at 282,286 to 283,356 _RS01125 HMPREF1078_RS01130: HMPREF1078_RS01130 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 283,444 to 284,631 _RS01130 HMPREF1078_RS01135: HMPREF1078_RS01135 - prephenate dehydratase, at 284,606 to 285,451 _RS01135 HMPREF1078_RS01140: HMPREF1078_RS01140 - hydrogen peroxide-inducible genes activator, at 285,837 to 286,763 _RS01140 HMPREF1078_RS01145: HMPREF1078_RS01145 - Dps family protein, at 287,117 to 287,605 _RS01145 HMPREF1078_RS01150: HMPREF1078_RS01150 - IS1182 family transposase, at 287,764 to 288,776 _RS01150 HMPREF1078_RS19680: HMPREF1078_RS19680 - transposase, at 288,877 to 289,257 _RS19680 HMPREF1078_RS01155: HMPREF1078_RS01155 - hypothetical protein, at 289,343 to 289,594 _RS01155 HMPREF1078_RS18295: HMPREF1078_RS18295 - helix-turn-helix domain-containing protein, at 289,581 to 289,787 _RS18295 HMPREF1078_RS01160: HMPREF1078_RS01160 - DUF6493 family protein, at 289,853 to 291,409 _RS01160 HMPREF1078_RS01165: HMPREF1078_RS01165 - agmatine deiminase family protein, at 291,472 to 292,509 _RS01165
Locus Name Description Strand Phenotype
HMPREF1078_RS01125 HMPREF1078_RS01125 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II - strong
HMPREF1078_RS01130 HMPREF1078_RS01130 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - strong
HMPREF1078_RS01135 HMPREF1078_RS01135 prephenate dehydratase - strong
HMPREF1078_RS01140 HMPREF1078_RS01140 hydrogen peroxide-inducible genes activator - cofit
HMPREF1078_RS01145 HMPREF1078_RS01145 Dps family protein + insig.
HMPREF1078_RS01150 HMPREF1078_RS01150 IS1182 family transposase + insig.
HMPREF1078_RS19680 HMPREF1078_RS19680 transposase + no data
HMPREF1078_RS01155 HMPREF1078_RS01155 hypothetical protein - no data
HMPREF1078_RS18295 HMPREF1078_RS18295 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS01160 HMPREF1078_RS01160 DUF6493 family protein + insig.
HMPREF1078_RS01165 HMPREF1078_RS01165 agmatine deiminase family protein + strong

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