Gene info for HMPREF1078_RS01080 in Parabacteroides merdae CL09T00C40

Annotation: tRNA guanosine(34) transglycosylase Tgt
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 271,804 to 272,934
See nucleotide sequence around HMPREF1078_RS01080 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS01055 and HMPREF1078_RS01060 overlap by 1 nucleotidesHMPREF1078_RS01060 and HMPREF1078_RS01065 overlap by 1 nucleotidesHMPREF1078_RS01065 and HMPREF1078_RS01070 are separated by 159 nucleotidesHMPREF1078_RS01070 and HMPREF1078_RS01075 are separated by 903 nucleotidesHMPREF1078_RS01075 and HMPREF1078_RS01080 are separated by 12 nucleotidesHMPREF1078_RS01080 and HMPREF1078_RS01085 are separated by 73 nucleotidesHMPREF1078_RS01085 and HMPREF1078_RS01090 overlap by 1 nucleotidesHMPREF1078_RS01090 and HMPREF1078_RS01095 are separated by 98 nucleotidesHMPREF1078_RS01095 and HMPREF1078_RS01100 are separated by 299 nucleotidesHMPREF1078_RS01100 and HMPREF1078_RS01105 are separated by 20 nucleotides HMPREF1078_RS01055: HMPREF1078_RS01055 - efflux RND transporter periplasmic adaptor subunit, at 263,049 to 264,116 _RS01055 HMPREF1078_RS01060: HMPREF1078_RS01060 - efflux RND transporter permease subunit, at 264,116 to 267,244 _RS01060 HMPREF1078_RS01065: HMPREF1078_RS01065 - TolC family protein, at 267,244 to 268,611 _RS01065 HMPREF1078_RS01070: HMPREF1078_RS01070 - DUF4925 domain-containing protein, at 268,771 to 269,802 _RS01070 HMPREF1078_RS01075: HMPREF1078_RS01075 - LptF/LptG family permease, at 270,706 to 271,791 _RS01075 HMPREF1078_RS01080: HMPREF1078_RS01080 - tRNA guanosine(34) transglycosylase Tgt, at 271,804 to 272,934 _RS01080 HMPREF1078_RS01085: HMPREF1078_RS01085 - 4Fe-4S dicluster domain-containing protein, at 273,008 to 274,597 _RS01085 HMPREF1078_RS01090: HMPREF1078_RS01090 - DUF362 domain-containing protein, at 274,597 to 275,529 _RS01090 HMPREF1078_RS01095: HMPREF1078_RS01095 - hypothetical protein, at 275,628 to 276,422 _RS01095 HMPREF1078_RS01100: HMPREF1078_RS01100 - phosphoribosylaminoimidazolecarboxamide formyltransferase, at 276,722 to 277,897 _RS01100 HMPREF1078_RS01105: HMPREF1078_RS01105 - NUDIX domain-containing protein, at 277,918 to 278,409 _RS01105
Locus Name Description Strand Phenotype
HMPREF1078_RS01055 HMPREF1078_RS01055 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS01060 HMPREF1078_RS01060 efflux RND transporter permease subunit + insig.
HMPREF1078_RS01065 HMPREF1078_RS01065 TolC family protein + insig.
HMPREF1078_RS01070 HMPREF1078_RS01070 DUF4925 domain-containing protein + sig.
HMPREF1078_RS01075 HMPREF1078_RS01075 LptF/LptG family permease - no data
HMPREF1078_RS01080 HMPREF1078_RS01080 tRNA guanosine(34) transglycosylase Tgt - sig.
HMPREF1078_RS01085 HMPREF1078_RS01085 4Fe-4S dicluster domain-containing protein - sig.
HMPREF1078_RS01090 HMPREF1078_RS01090 DUF362 domain-containing protein - insig.
HMPREF1078_RS01095 HMPREF1078_RS01095 hypothetical protein + insig.
HMPREF1078_RS01100 HMPREF1078_RS01100 phosphoribosylaminoimidazolecarboxamide formyltransferase - insig.
HMPREF1078_RS01105 HMPREF1078_RS01105 NUDIX domain-containing protein - insig.

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