Gene info for HMPREF1078_RS00980 in Parabacteroides merdae CL09T00C40

Annotation: HU family DNA-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 240,683 to 240,967
See nucleotide sequence around HMPREF1078_RS00980 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00955 and HMPREF1078_RS00960 are separated by 75 nucleotidesHMPREF1078_RS00960 and HMPREF1078_RS00965 overlap by 4 nucleotidesHMPREF1078_RS00965 and HMPREF1078_RS00970 are separated by 76 nucleotidesHMPREF1078_RS00970 and HMPREF1078_RS00975 are separated by 129 nucleotidesHMPREF1078_RS00975 and HMPREF1078_RS00980 are separated by 41 nucleotidesHMPREF1078_RS00980 and HMPREF1078_RS00990 are separated by 1301 nucleotidesHMPREF1078_RS00990 and HMPREF1078_RS00995 are separated by 408 nucleotidesHMPREF1078_RS00995 and HMPREF1078_RS01000 are separated by 41 nucleotidesHMPREF1078_RS01000 and HMPREF1078_RS01005 are separated by 7 nucleotidesHMPREF1078_RS01005 and HMPREF1078_RS01010 are separated by 102 nucleotides HMPREF1078_RS00955: HMPREF1078_RS00955 - V-type ATP synthase subunit B, at 233,709 to 235,028 _RS00955 HMPREF1078_RS00960: HMPREF1078_RS00960 - V-type ATP synthase subunit D, at 235,104 to 235,727 _RS00960 HMPREF1078_RS00965: HMPREF1078_RS00965 - V-type ATPase 116kDa subunit family protein, at 235,724 to 237,544 _RS00965 HMPREF1078_RS00970: HMPREF1078_RS00970 - hypothetical protein, at 237,621 to 238,073 _RS00970 HMPREF1078_RS00975: HMPREF1078_RS00975 - DPP IV N-terminal domain-containing protein, at 238,203 to 240,641 _RS00975 HMPREF1078_RS00980: HMPREF1078_RS00980 - HU family DNA-binding protein, at 240,683 to 240,967 _RS00980 HMPREF1078_RS00990: HMPREF1078_RS00990 - DUF6261 family protein, at 242,269 to 243,105 _RS00990 HMPREF1078_RS00995: HMPREF1078_RS00995 - BlaI/MecI/CopY family transcriptional regulator, at 243,514 to 243,888 _RS00995 HMPREF1078_RS01000: HMPREF1078_RS01000 - M56 family metallopeptidase, at 243,930 to 245,138 _RS01000 HMPREF1078_RS01005: HMPREF1078_RS01005 - DUF4934 domain-containing protein, at 245,146 to 246,384 _RS01005 HMPREF1078_RS01010: HMPREF1078_RS01010 - Gfo/Idh/MocA family oxidoreductase, at 246,487 to 247,464 _RS01010
Locus Name Description Strand Phenotype
HMPREF1078_RS00955 HMPREF1078_RS00955 V-type ATP synthase subunit B + strong
HMPREF1078_RS00960 HMPREF1078_RS00960 V-type ATP synthase subunit D + strong
HMPREF1078_RS00965 HMPREF1078_RS00965 V-type ATPase 116kDa subunit family protein + strong
HMPREF1078_RS00970 HMPREF1078_RS00970 hypothetical protein + strong
HMPREF1078_RS00975 HMPREF1078_RS00975 DPP IV N-terminal domain-containing protein + insig.
HMPREF1078_RS00980 HMPREF1078_RS00980 HU family DNA-binding protein - strong
HMPREF1078_RS00990 HMPREF1078_RS00990 DUF6261 family protein - insig.
HMPREF1078_RS00995 HMPREF1078_RS00995 BlaI/MecI/CopY family transcriptional regulator + insig.
HMPREF1078_RS01000 HMPREF1078_RS01000 M56 family metallopeptidase + sig.
HMPREF1078_RS01005 HMPREF1078_RS01005 DUF4934 domain-containing protein + insig.
HMPREF1078_RS01010 HMPREF1078_RS01010 Gfo/Idh/MocA family oxidoreductase + insig.

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