Gene info for HMPREF1078_RS00870 in Parabacteroides merdae CL09T00C40

Annotation: GAF domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 211,643 to 212,116
See nucleotide sequence around HMPREF1078_RS00870 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00845 and HMPREF1078_RS00850 are separated by 48 nucleotidesHMPREF1078_RS00850 and HMPREF1078_RS00855 are separated by 72 nucleotidesHMPREF1078_RS00855 and HMPREF1078_RS00860 overlap by 14 nucleotidesHMPREF1078_RS00860 and HMPREF1078_RS00865 are separated by 273 nucleotidesHMPREF1078_RS00865 and HMPREF1078_RS00870 are separated by 117 nucleotidesHMPREF1078_RS00870 and HMPREF1078_RS00875 are separated by 62 nucleotidesHMPREF1078_RS00875 and HMPREF1078_RS00880 are separated by 42 nucleotidesHMPREF1078_RS00880 and HMPREF1078_RS00885 are separated by 173 nucleotidesHMPREF1078_RS00885 and HMPREF1078_RS00890 are separated by 596 nucleotidesHMPREF1078_RS00890 and HMPREF1078_RS00895 are separated by 93 nucleotides HMPREF1078_RS00845: HMPREF1078_RS00845 - YigZ family protein, at 201,559 to 202,167 _RS00845 HMPREF1078_RS00850: HMPREF1078_RS00850 - hypothetical protein, at 202,216 to 203,409 _RS00850 HMPREF1078_RS00855: HMPREF1078_RS00855 - Na+/H+ antiporter NhaA, at 203,482 to 204,846 _RS00855 HMPREF1078_RS00860: HMPREF1078_RS00860 - aldo/keto reductase, at 204,833 to 205,720 _RS00860 HMPREF1078_RS00865: HMPREF1078_RS00865 - MG2 domain-containing protein, at 205,994 to 211,525 _RS00865 HMPREF1078_RS00870: HMPREF1078_RS00870 - GAF domain-containing protein, at 211,643 to 212,116 _RS00870 HMPREF1078_RS00875: HMPREF1078_RS00875 - MATE family efflux transporter, at 212,179 to 213,525 _RS00875 HMPREF1078_RS00880: HMPREF1078_RS00880 - cytidylate kinase-like family protein, at 213,568 to 214,209 _RS00880 HMPREF1078_RS00885: HMPREF1078_RS00885 - sulfide-dependent adenosine diphosphate thiazole synthase, at 214,383 to 215,153 _RS00885 HMPREF1078_RS00890: HMPREF1078_RS00890 - hypothetical protein, at 215,750 to 216,160 _RS00890 HMPREF1078_RS00895: HMPREF1078_RS00895 - efflux RND transporter periplasmic adaptor subunit, at 216,254 to 217,471 _RS00895
Locus Name Description Strand Phenotype
HMPREF1078_RS00845 HMPREF1078_RS00845 YigZ family protein + insig.
HMPREF1078_RS00850 HMPREF1078_RS00850 hypothetical protein + insig.
HMPREF1078_RS00855 HMPREF1078_RS00855 Na+/H+ antiporter NhaA + insig.
HMPREF1078_RS00860 HMPREF1078_RS00860 aldo/keto reductase + insig.
HMPREF1078_RS00865 HMPREF1078_RS00865 MG2 domain-containing protein + insig.
HMPREF1078_RS00870 HMPREF1078_RS00870 GAF domain-containing protein - insig.
HMPREF1078_RS00875 HMPREF1078_RS00875 MATE family efflux transporter + insig.
HMPREF1078_RS00880 HMPREF1078_RS00880 cytidylate kinase-like family protein + insig.
HMPREF1078_RS00885 HMPREF1078_RS00885 sulfide-dependent adenosine diphosphate thiazole synthase + insig.
HMPREF1078_RS00890 HMPREF1078_RS00890 hypothetical protein + cofit
HMPREF1078_RS00895 HMPREF1078_RS00895 efflux RND transporter periplasmic adaptor subunit + strong

Or browse nearby genes

Or see the comparative fitness browser