Gene info for HMPREF1078_RS00815 in Parabacteroides merdae CL09T00C40

Annotation: DUF4827 family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 193,889 to 194,470
See nucleotide sequence around HMPREF1078_RS00815 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00790 and HMPREF1078_RS00795 are separated by 214 nucleotidesHMPREF1078_RS00795 and HMPREF1078_RS00800 are separated by 762 nucleotidesHMPREF1078_RS00800 and HMPREF1078_RS00805 are separated by 150 nucleotidesHMPREF1078_RS00805 and HMPREF1078_RS00810 are separated by 38 nucleotidesHMPREF1078_RS00810 and HMPREF1078_RS00815 are separated by 54 nucleotidesHMPREF1078_RS00815 and HMPREF1078_RS00820 are separated by 10 nucleotidesHMPREF1078_RS00820 and HMPREF1078_RS00825 are separated by 301 nucleotidesHMPREF1078_RS00825 and HMPREF1078_RS00830 overlap by 23 nucleotidesHMPREF1078_RS00830 and HMPREF1078_RS00835 are separated by 12 nucleotidesHMPREF1078_RS00835 and HMPREF1078_RS00840 overlap by 4 nucleotides HMPREF1078_RS00790: HMPREF1078_RS00790 - outer membrane protein transport protein, at 187,421 to 189,094 _RS00790 HMPREF1078_RS00795: HMPREF1078_RS00795 - sigma-70 family RNA polymerase sigma factor, at 189,309 to 189,902 _RS00795 HMPREF1078_RS00800: HMPREF1078_RS00800 - ribulose-phosphate 3-epimerase, at 190,665 to 191,315 _RS00800 HMPREF1078_RS00805: HMPREF1078_RS00805 - ComEC/Rec2 family competence protein, at 191,466 to 192,746 _RS00805 HMPREF1078_RS00810: HMPREF1078_RS00810 - bifunctional oligoribonuclease/PAP phosphatase NrnA, at 192,785 to 193,834 _RS00810 HMPREF1078_RS00815: HMPREF1078_RS00815 - DUF4827 family protein, at 193,889 to 194,470 _RS00815 HMPREF1078_RS00820: HMPREF1078_RS00820 - phosphoglucosamine mutase, at 194,481 to 195,869 _RS00820 HMPREF1078_RS00825: HMPREF1078_RS00825 - gliding motility-associated C-terminal domain-containing protein, at 196,171 to 197,520 _RS00825 HMPREF1078_RS00830: HMPREF1078_RS00830 - lytic transglycosylase domain-containing protein, at 197,498 to 198,475 _RS00830 HMPREF1078_RS00835: HMPREF1078_RS00835 - excinuclease ABC subunit UvrA, at 198,488 to 201,340 _RS00835 HMPREF1078_RS00840: HMPREF1078_RS00840 - hypothetical protein, at 201,337 to 201,555 _RS00840
Locus Name Description Strand Phenotype
HMPREF1078_RS00790 HMPREF1078_RS00790 outer membrane protein transport protein + strong
HMPREF1078_RS00795 HMPREF1078_RS00795 sigma-70 family RNA polymerase sigma factor + strong
HMPREF1078_RS00800 HMPREF1078_RS00800 ribulose-phosphate 3-epimerase + no data
HMPREF1078_RS00805 HMPREF1078_RS00805 ComEC/Rec2 family competence protein + insig.
HMPREF1078_RS00810 HMPREF1078_RS00810 bifunctional oligoribonuclease/PAP phosphatase NrnA + no data
HMPREF1078_RS00815 HMPREF1078_RS00815 DUF4827 family protein + strong
HMPREF1078_RS00820 HMPREF1078_RS00820 phosphoglucosamine mutase + no data
HMPREF1078_RS00825 HMPREF1078_RS00825 gliding motility-associated C-terminal domain-containing protein + strong
HMPREF1078_RS00830 HMPREF1078_RS00830 lytic transglycosylase domain-containing protein + cofit
HMPREF1078_RS00835 HMPREF1078_RS00835 excinuclease ABC subunit UvrA + strong
HMPREF1078_RS00840 HMPREF1078_RS00840 hypothetical protein + insig.

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