Gene info for HMPREF1078_RS00680 in Parabacteroides merdae CL09T00C40

Annotation: glycoside hydrolase family 97 protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 159,258 to 161,246
See nucleotide sequence around HMPREF1078_RS00680 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00655 and HMPREF1078_RS00660 are separated by 106 nucleotidesHMPREF1078_RS00660 and HMPREF1078_RS00665 are separated by 253 nucleotidesHMPREF1078_RS00665 and HMPREF1078_RS00670 are separated by 0 nucleotidesHMPREF1078_RS00670 and HMPREF1078_RS00675 are separated by 247 nucleotidesHMPREF1078_RS00675 and HMPREF1078_RS00680 are separated by 120 nucleotidesHMPREF1078_RS00680 and HMPREF1078_RS00685 overlap by 10 nucleotidesHMPREF1078_RS00685 and HMPREF1078_RS00690 are separated by 80 nucleotidesHMPREF1078_RS00690 and HMPREF1078_RS00695 are separated by 36 nucleotidesHMPREF1078_RS00695 and HMPREF1078_RS00700 are separated by 156 nucleotidesHMPREF1078_RS00700 and HMPREF1078_RS00705 are separated by 22 nucleotides HMPREF1078_RS00655: HMPREF1078_RS00655 - uracil phosphoribosyltransferase, at 154,035 to 154,688 _RS00655 HMPREF1078_RS00660: HMPREF1078_RS00660 - HU family DNA-binding protein, at 154,795 to 155,085 _RS00660 HMPREF1078_RS00665: HMPREF1078_RS00665 - UDP-N-acetylmuramate dehydrogenase, at 155,339 to 156,352 _RS00665 HMPREF1078_RS00670: HMPREF1078_RS00670 - MBL fold metallo-hydrolase, at 156,353 to 157,138 _RS00670 HMPREF1078_RS00675: HMPREF1078_RS00675 - SGNH/GDSL hydrolase family protein, at 157,386 to 159,137 _RS00675 HMPREF1078_RS00680: HMPREF1078_RS00680 - glycoside hydrolase family 97 protein, at 159,258 to 161,246 _RS00680 HMPREF1078_RS00685: HMPREF1078_RS00685 - MBL fold metallo-hydrolase, at 161,237 to 162,043 _RS00685 HMPREF1078_RS00690: HMPREF1078_RS00690 - tRNA-Cys, at 162,124 to 162,195 _RS00690 HMPREF1078_RS00695: HMPREF1078_RS00695 - tRNA-Cys, at 162,232 to 162,303 _RS00695 HMPREF1078_RS00700: HMPREF1078_RS00700 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 162,460 to 163,017 _RS00700 HMPREF1078_RS00705: HMPREF1078_RS00705 - dTDP-glucose 4,6-dehydratase, at 163,040 to 164,179 _RS00705
Locus Name Description Strand Phenotype
HMPREF1078_RS00655 HMPREF1078_RS00655 uracil phosphoribosyltransferase - insig.
HMPREF1078_RS00660 HMPREF1078_RS00660 HU family DNA-binding protein - sig.
HMPREF1078_RS00665 HMPREF1078_RS00665 UDP-N-acetylmuramate dehydrogenase + no data
HMPREF1078_RS00670 HMPREF1078_RS00670 MBL fold metallo-hydrolase + insig.
HMPREF1078_RS00675 HMPREF1078_RS00675 SGNH/GDSL hydrolase family protein - insig.
HMPREF1078_RS00680 HMPREF1078_RS00680 glycoside hydrolase family 97 protein + strong
HMPREF1078_RS00685 HMPREF1078_RS00685 MBL fold metallo-hydrolase - cofit
HMPREF1078_RS00690 HMPREF1078_RS00690 tRNA-Cys - insig.
HMPREF1078_RS00695 HMPREF1078_RS00695 tRNA-Cys - no data
HMPREF1078_RS00700 HMPREF1078_RS00700 dTDP-4-dehydrorhamnose 3,5-epimerase + no data
HMPREF1078_RS00705 HMPREF1078_RS00705 dTDP-glucose 4,6-dehydratase + no data

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