Gene info for HMPREF1078_RS00580 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 128,853 to 130,103
See nucleotide sequence around HMPREF1078_RS00580 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00555 and HMPREF1078_RS00560 are separated by 17 nucleotidesHMPREF1078_RS00560 and HMPREF1078_RS00565 overlap by 16 nucleotidesHMPREF1078_RS00565 and HMPREF1078_RS00570 are separated by 182 nucleotidesHMPREF1078_RS00570 and HMPREF1078_RS00575 are separated by 400 nucleotidesHMPREF1078_RS00575 and HMPREF1078_RS00580 are separated by 108 nucleotidesHMPREF1078_RS00580 and HMPREF1078_RS00585 are separated by 3 nucleotidesHMPREF1078_RS00585 and HMPREF1078_RS00590 are separated by 149 nucleotidesHMPREF1078_RS00590 and HMPREF1078_RS20045 are separated by 81 nucleotidesHMPREF1078_RS20045 and HMPREF1078_RS00600 are separated by 122 nucleotidesHMPREF1078_RS00600 and HMPREF1078_RS00605 are separated by 181 nucleotides HMPREF1078_RS00555: HMPREF1078_RS00555 - CDP-alcohol phosphatidyltransferase family protein, at 124,958 to 125,641 _RS00555 HMPREF1078_RS00560: HMPREF1078_RS00560 - GtrA family protein, at 125,659 to 126,165 _RS00560 HMPREF1078_RS00565: HMPREF1078_RS00565 - phosphatidylglycerophosphatase A, at 126,150 to 126,623 _RS00565 HMPREF1078_RS00570: HMPREF1078_RS00570 - inositol-3-phosphate synthase, at 126,806 to 128,098 _RS00570 HMPREF1078_RS00575: HMPREF1078_RS00575 - RNA-binding protein, at 128,499 to 128,744 _RS00575 HMPREF1078_RS00580: HMPREF1078_RS00580 - hypothetical protein, at 128,853 to 130,103 _RS00580 HMPREF1078_RS00585: HMPREF1078_RS00585 - hypothetical protein, at 130,107 to 130,352 _RS00585 HMPREF1078_RS00590: HMPREF1078_RS00590 - RNA polymerase sigma-70 factor, at 130,502 to 131,101 _RS00590 HMPREF1078_RS20045: HMPREF1078_RS20045 - FecR domain-containing protein, at 131,183 to 131,755 _RS20045 HMPREF1078_RS00600: HMPREF1078_RS00600 - DUF4974 domain-containing protein, at 131,878 to 132,207 _RS00600 HMPREF1078_RS00605: HMPREF1078_RS00605 - TonB-dependent receptor, at 132,389 to 135,718 _RS00605
Locus Name Description Strand Phenotype
HMPREF1078_RS00555 HMPREF1078_RS00555 CDP-alcohol phosphatidyltransferase family protein - strong
HMPREF1078_RS00560 HMPREF1078_RS00560 GtrA family protein - cofit
HMPREF1078_RS00565 HMPREF1078_RS00565 phosphatidylglycerophosphatase A - strong
HMPREF1078_RS00570 HMPREF1078_RS00570 inositol-3-phosphate synthase - cofit
HMPREF1078_RS00575 HMPREF1078_RS00575 RNA-binding protein + insig.
HMPREF1078_RS00580 HMPREF1078_RS00580 hypothetical protein + sig.
HMPREF1078_RS00585 HMPREF1078_RS00585 hypothetical protein - insig.
HMPREF1078_RS00590 HMPREF1078_RS00590 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS20045 HMPREF1078_RS20045 FecR domain-containing protein + insig.
HMPREF1078_RS00600 HMPREF1078_RS00600 DUF4974 domain-containing protein + insig.
HMPREF1078_RS00605 HMPREF1078_RS00605 TonB-dependent receptor + insig.

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