Gene info for HMPREF1078_RS00465 in Parabacteroides merdae CL09T00C40

Annotation: monofunctional biosynthetic peptidoglycan transglycosylase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 108,115 to 108,933
See nucleotide sequence around HMPREF1078_RS00465 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00440 and HMPREF1078_RS00445 are separated by 225 nucleotidesHMPREF1078_RS00445 and HMPREF1078_RS00450 are separated by 6 nucleotidesHMPREF1078_RS00450 and HMPREF1078_RS00455 are separated by 40 nucleotidesHMPREF1078_RS00455 and HMPREF1078_RS00460 are separated by 85 nucleotidesHMPREF1078_RS00460 and HMPREF1078_RS00465 are separated by 35 nucleotidesHMPREF1078_RS00465 and HMPREF1078_RS00470 overlap by 4 nucleotidesHMPREF1078_RS00470 and HMPREF1078_RS00475 overlap by 4 nucleotidesHMPREF1078_RS00475 and HMPREF1078_RS00480 overlap by 31 nucleotidesHMPREF1078_RS00480 and HMPREF1078_RS00485 are separated by 351 nucleotidesHMPREF1078_RS00485 and HMPREF1078_RS00490 are separated by 44 nucleotides HMPREF1078_RS00440: HMPREF1078_RS00440 - potassium transporter TrkG, at 100,800 to 102,620 _RS00440 HMPREF1078_RS00445: HMPREF1078_RS00445 - NUDIX domain-containing protein, at 102,846 to 103,586 _RS00445 HMPREF1078_RS00450: HMPREF1078_RS00450 - FGGY family carbohydrate kinase, at 103,593 to 105,080 _RS00450 HMPREF1078_RS00455: HMPREF1078_RS00455 - xylose isomerase, at 105,121 to 106,449 _RS00455 HMPREF1078_RS00460: HMPREF1078_RS00460 - D-xylose transporter XylE, at 106,535 to 108,079 _RS00460 HMPREF1078_RS00465: HMPREF1078_RS00465 - monofunctional biosynthetic peptidoglycan transglycosylase, at 108,115 to 108,933 _RS00465 HMPREF1078_RS00470: HMPREF1078_RS00470 - lipoyl(octanoyl) transferase LipB, at 108,930 to 109,598 _RS00470 HMPREF1078_RS00475: HMPREF1078_RS00475 - tRNA-dihydrouridine synthase family protein, at 109,595 to 110,557 _RS00475 HMPREF1078_RS00480: HMPREF1078_RS00480 - exodeoxyribonuclease III, at 110,527 to 111,288 _RS00480 HMPREF1078_RS00485: HMPREF1078_RS00485 - linear amide C-N hydrolase, at 111,640 to 112,689 _RS00485 HMPREF1078_RS00490: HMPREF1078_RS00490 - ADP-ribosylglycohydrolase family protein, at 112,734 to 113,507 _RS00490
Locus Name Description Strand Phenotype
HMPREF1078_RS00440 HMPREF1078_RS00440 potassium transporter TrkG - insig.
HMPREF1078_RS00445 HMPREF1078_RS00445 NUDIX domain-containing protein + strong
HMPREF1078_RS00450 HMPREF1078_RS00450 FGGY family carbohydrate kinase + strong
HMPREF1078_RS00455 HMPREF1078_RS00455 xylose isomerase + strong
HMPREF1078_RS00460 HMPREF1078_RS00460 D-xylose transporter XylE + strong
HMPREF1078_RS00465 HMPREF1078_RS00465 monofunctional biosynthetic peptidoglycan transglycosylase + strong
HMPREF1078_RS00470 HMPREF1078_RS00470 lipoyl(octanoyl) transferase LipB + insig.
HMPREF1078_RS00475 HMPREF1078_RS00475 tRNA-dihydrouridine synthase family protein + insig.
HMPREF1078_RS00480 HMPREF1078_RS00480 exodeoxyribonuclease III - insig.
HMPREF1078_RS00485 HMPREF1078_RS00485 linear amide C-N hydrolase + insig.
HMPREF1078_RS00490 HMPREF1078_RS00490 ADP-ribosylglycohydrolase family protein + insig.

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